Pinus taeda (pinus_taeda)

This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Download candidate protein FASTA for this species

Pathway Coverage

6 Pathways

Terpenoid pathway 27.92% Phenylpropanoid pathway 23.93% Alkaloid pathway 19.88% Flavonoid pathway 15.18% Rosmarinic acid pathway 7.75% Steroid pathway 5.34%

Family Distribution

12692 Family-Level Calls

C4H 5.65% C3'H/CYP98A 5.17% UGT 4.84% 4CL 4.56% CYP76 4.22% BAHD 4.21% POD 4.18% 7DLGT 3.84%

Other Families 63.32%

More Families (98)

UFGT 426 3.36% IFS 424 3.34% TPS 369 2.91% F3H 301 2.37% DWF4/CYP90B1 292 2.3% CAD 273 2.15% GES 258 2.03% F3'H/CYP75B 253 1.99% CAS 239 1.88% BR6OX2/CYP85A2 234 1.84% G8O/G8H 232 1.83% LAC 227 1.79% T3O 208 1.64% H6H 200 1.58% IFR 189 1.49% T16H 183 1.44% CODM/T6ODM 181 1.43% IO 156 1.23% NMT 151 1.19% F3'5'H/CYP75A 138 1.09% TRI/TRII 135 1.06% SGD 134 1.06% COMT 128 1.01% HCT 118 0.93% PAL 117 0.92% STR 98 0.77% SMT1/SMT2/SMT3 98 0.77% FNS 96 0.76% F5H/CYP84A 94 0.74% PYKS 92 0.72% 8HGO 89 0.7% 7DLH 89 0.7% RAS 85 0.67% GS 84 0.66% 16OMT 80 0.63% PMT 76 0.6% SLS 75 0.59% ANR 74 0.58% HMGR 74 0.58% ANS/LDOX 73 0.58% DFR 69 0.54% CYP90D1 69 0.54% CHS 67 0.53% CCR 64 0.5% LAMT 60 0.47% NCS 59 0.46% CSE 54 0.43% TAT 50 0.39% CPD/CYP90A1 47 0.37% GGPPS 43 0.34% BR6OX1/CYP85A1 41 0.32% CYP80B1 39 0.31% ISY 38 0.3% BBE 34 0.27% CYP71 31 0.24% XMT_MXMT_DXMT 28 0.22% ADC 26 0.2% ODC 24 0.19% CHI 24 0.19% FPPS 24 0.19% CYP719 23 0.18% COR 22 0.17% 6OMT_4OMT_SOMT 19 0.15% CCoAOMT 18 0.14% ROT3/CYP90C1 18 0.14% CNMT 17 0.13% MPO 15 0.12% FLS 15 0.12% DWF1 13 0.1% DET2 12 0.09% AACT 12 0.09% CYP51G1 10 0.08% CPR 9 0.07% HDS/IspG 9 0.07% IDI 9 0.07% MVK 8 0.06% HPPR 7 0.06% DWF5 7 0.06% CYP80F1 6 0.05% CMK/IspE 6 0.05% DXS 6 0.05% TDC 4 0.03% SQS/FDFT1 4 0.03% SQE 4 0.03% HYD1 3 0.02% CPI1 3 0.02% HDR/IspH 3 0.02% HMGS 3 0.02% MVD 3 0.02% FK 2 0.02% SMO1/SMO2 2 0.02% DWF7 2 0.02% DXR 2 0.02% PMK 2 0.02% MDS/IspF 2 0.02% TYDC_DDC 1 0.01% MCT/IspD 1 0.01% GPPS 1 0.01%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Pathway-Level Records	Detected Families	Top family	Results
Terpenoid pathway	1469	18	UGT (484)	View species results
Phenylpropanoid pathway	1259	13	POD (460)	View species results
Alkaloid pathway	1046	30	7DLGT (246)	View species results
Flavonoid pathway	799	16	UFGT (341)	View species results
Rosmarinic acid pathway	408	7	4CL (161)	View species results
Steroid pathway	281	16	CAS (195)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Detected families	Assignment calls	Included families
P450/oxygenase	24	4571	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	737	BAHD, HCT, RAS

Identification Result List

Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.

Current pathway filter: Terpenoid pathway

Protein/Isoform Record	Pathway	Family	Confidence	Status	Best Target
PITA_000056140-RA	Terpenoid	BAHD	medium	borderline	BAHD__00044__sp_Q56WD9_THIK2_ARATH
PITA_000056432-RA	Terpenoid	BAHD	medium	pass	BAHD__00022__sp_K7PEY4_RAM2_MEDTR
PITA_000056452-RA	Terpenoid	BAHD	medium	pass	BAHD__00055__sp_Q8H780_SCP13_ARATH
PITA_000056963-RA	Terpenoid	BAHD	low	borderline	BAHD__00006__sp_A0A2R6Q326_AT16_ACTCC
PITA_000057066-RA	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
PITA_000057579-RA	Terpenoid	BAHD	low	borderline	BAHD__00022__sp_K7PEY4_RAM2_MEDTR
PITA_000058004-RA	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
PITA_000058209-RA	Terpenoid	BAHD	low	borderline	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
PITA_000058230-RA	Terpenoid	BAHD	medium	pass	BAHD__00025__sp_O64810_SCP10_ARATH
PITA_000058307-RA	Terpenoid	BAHD	medium	pass	BAHD__00026__sp_O64811_SCP9_ARATH
PITA_000058390-RA	Terpenoid	BAHD	medium	pass	BAHD__00073__sp_Q9FF86_DCR_ARATH
PITA_000058423-RA	Terpenoid	BAHD	medium	pass	BAHD__00068__sp_Q9C533_ZDHC1_ARATH
PITA_000058424-RA	Terpenoid	BAHD	low	borderline	BAHD__00068__sp_Q9C533_ZDHC1_ARATH
PITA_000058738-RA	Terpenoid	BAHD	medium	pass	BAHD__00001__sp_A0A068BGA5_AT1_ACTDE
PITA_000058931-RA	Terpenoid	BAHD	medium	pass	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
PITA_000059017-RA	Terpenoid	BAHD	medium	pass	BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH
PITA_000059153-RA	Terpenoid	BAHD	medium	pass	BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000059313-RA	Terpenoid	BAHD	medium	pass	BAHD__00011__sp_A1A442_DGAT2_RICCO
PITA_000059370-RA	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
PITA_000059784-RA	Terpenoid	BAHD	low	borderline	BAHD__00004__sp_A0A0M4FCN7_RAM2_PETHY
PITA_000060022-RA	Terpenoid	BAHD	medium	pass	BAHD__00087__sp_Q9M3B1_WSD6_ARATH
PITA_000060175-RA	Terpenoid	BAHD	low	borderline	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
PITA_000060455-RA	Terpenoid	BAHD	medium	pass	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
PITA_000060456-RA	Terpenoid	BAHD	medium	pass	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
PITA_000060600-RA	Terpenoid	BAHD	medium	pass	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
PITA_000060620-RA	Terpenoid	BAHD	low	borderline	BAHD__00081__sp_Q9LJB4_5MAT_ARATH
PITA_000060743-RA	Terpenoid	BAHD	low	borderline	BAHD__00047__sp_Q5KS41_WSD11_ARATH
PITA_000060771-RA	Terpenoid	BAHD	medium	pass	BAHD__00012__sp_A1XWY7_CFAT_PETHY
PITA_000061450-RA	Terpenoid	BAHD	medium	pass	BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN
PITA_000061660-RA	Terpenoid	BAHD	medium	pass	BAHD__00055__sp_Q8H780_SCP13_ARATH
PITA_000061751-RA	Terpenoid	BAHD	low	borderline	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
PITA_000061930-RA	Terpenoid	BAHD	medium	pass	BAHD__00055__sp_Q8H780_SCP13_ARATH
PITA_000062102-RA	Terpenoid	BAHD	medium	pass	BAHD__00062__sp_Q93V61_LCAT3_ARATH
PITA_000062104-RA	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
PITA_000062382-RA	Terpenoid	BAHD	medium	pass	BAHD__00058__sp_Q8LG50_LPAT2_ARATH
PITA_000062528-RA	Terpenoid	BAHD	medium	pass	BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000062569-RA	Terpenoid	BAHD	medium	pass	BAHD__00021__sp_K7K424_DAT2D_SOYBN
PITA_000063394-RA	Terpenoid	BAHD	medium	pass	BAHD__00067__sp_Q9ASU1_DGAT2_ARATH
PITA_000063937-RA	Terpenoid	BAHD	medium	pass	BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000064005-RA	Terpenoid	BAHD	low	borderline	BAHD__00002__sp_A0A068BIF1_AT9_ACTER
PITA_000064017-RA	Terpenoid	BAHD	medium	pass	BAHD__00012__sp_A1XWY7_CFAT_PETHY
PITA_000064018-RA	Terpenoid	BAHD	medium	pass	BAHD__00012__sp_A1XWY7_CFAT_PETHY
PITA_000064082-RA	Terpenoid	BAHD	low	borderline	BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN
PITA_000064250-RA	Terpenoid	BAHD	medium	pass	BAHD__00062__sp_Q93V61_LCAT3_ARATH
PITA_000064394-RA	Terpenoid	BAHD	low	borderline	BAHD__00073__sp_Q9FF86_DCR_ARATH
PITA_000064703-RA	Terpenoid	BAHD	medium	pass	BAHD__00026__sp_O64811_SCP9_ARATH
PITA_000064969-RA	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
PITA_000065169-RA	Terpenoid	BAHD	medium	pass	BAHD__00012__sp_A1XWY7_CFAT_PETHY
PITA_000065934-RA	Terpenoid	BAHD	low	borderline	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
PITA_000066698-RA	Terpenoid	BAHD	low	borderline	BAHD__00073__sp_Q9FF86_DCR_ARATH