PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000004087-RA Alkaloid H6H low borderline
PITA_000004288-RA Alkaloid H6H low borderline
PITA_000004387-RA Alkaloid H6H medium borderline
PITA_000005876-RA Alkaloid H6H low borderline
PITA_000005980-RA Alkaloid H6H low borderline
PITA_000005982-RA Alkaloid H6H low borderline
PITA_000008083-RA Alkaloid H6H medium borderline
PITA_000010503-RA Alkaloid H6H medium borderline
PITA_000011998-RA Alkaloid H6H low borderline
PITA_000012008-RA Alkaloid H6H low borderline
PITA_000012625-RA Alkaloid H6H medium borderline
PITA_000014195-RA Alkaloid H6H medium pass
PITA_000014389-RA Alkaloid H6H low borderline
PITA_000015494-RA Alkaloid H6H medium borderline
PITA_000015932-RA Alkaloid H6H low borderline
PITA_000015935-RA Alkaloid H6H low borderline
PITA_000015937-RA Alkaloid H6H low borderline
PITA_000016144-RA Alkaloid H6H low borderline
PITA_000016528-RA Alkaloid H6H medium borderline
PITA_000016687-RA Alkaloid H6H medium borderline
PITA_000016930-RA Alkaloid H6H medium borderline
PITA_000017254-RA Alkaloid H6H medium borderline
PITA_000017871-RA Alkaloid H6H low borderline
PITA_000017891-RA Alkaloid H6H medium borderline
PITA_000019901-RA Alkaloid H6H low borderline
PITA_000020115-RA Alkaloid H6H low borderline
PITA_000020402-RA Alkaloid H6H low borderline
PITA_000020403-RA Alkaloid H6H low borderline
PITA_000020605-RA Alkaloid H6H low borderline
PITA_000021167-RA Alkaloid H6H medium borderline
PITA_000021821-RA Alkaloid H6H medium borderline
PITA_000021824-RA Alkaloid H6H low borderline
PITA_000022352-RA Alkaloid H6H medium borderline
PITA_000022499-RA Alkaloid H6H low borderline
PITA_000023281-RA Alkaloid H6H medium borderline
PITA_000024382-RA Alkaloid H6H low borderline
PITA_000024383-RA Alkaloid H6H low borderline
PITA_000024679-RA Alkaloid H6H low borderline
PITA_000024800-RA Alkaloid H6H medium borderline
PITA_000025161-RA Alkaloid H6H low borderline
PITA_000025162-RA Alkaloid H6H low borderline
PITA_000025163-RA Alkaloid H6H medium borderline
PITA_000025166-RA Alkaloid H6H medium borderline
PITA_000025205-RA Alkaloid H6H medium borderline
PITA_000026550-RA Alkaloid H6H low borderline
PITA_000026772-RA Alkaloid H6H low borderline
PITA_000027799-RA Alkaloid H6H low borderline
PITA_000027990-RA Alkaloid H6H medium borderline
PITA_000027992-RA Alkaloid H6H low borderline
PITA_000028599-RA Alkaloid H6H medium borderline