PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000057135-RA Flavonoid IFS medium borderline
PITA_000057147-RA Flavonoid IFS low borderline
PITA_000057180-RA Flavonoid IFS low borderline
PITA_000057181-RA Flavonoid IFS medium borderline
PITA_000057462-RA Flavonoid IFS medium borderline
PITA_000057544-RA Flavonoid IFS low borderline
PITA_000057948-RA Flavonoid IFS low borderline
PITA_000058072-RA Flavonoid IFS low borderline
PITA_000058194-RA Flavonoid IFS low borderline
PITA_000058201-RA Flavonoid IFS low borderline
PITA_000058385-RA Flavonoid IFS medium borderline
PITA_000058398-RA Flavonoid IFS low borderline
PITA_000058735-RA Flavonoid IFS low borderline
PITA_000058857-RA Flavonoid IFS medium borderline
PITA_000058864-RA Flavonoid IFS low borderline
PITA_000058968-RA Flavonoid IFS low borderline
PITA_000059173-RA Flavonoid IFS low borderline
PITA_000059899-RA Flavonoid IFS low borderline
PITA_000059947-RA Flavonoid IFS low borderline
PITA_000060242-RA Flavonoid IFS medium borderline
PITA_000060494-RA Flavonoid IFS medium borderline
PITA_000060495-RA Flavonoid IFS medium borderline
PITA_000060496-RA Flavonoid IFS medium borderline
PITA_000060684-RA Flavonoid IFS medium borderline
PITA_000060831-RA Flavonoid IFS low borderline
PITA_000060835-RA Flavonoid IFS medium borderline
PITA_000060836-RA Flavonoid IFS medium borderline
PITA_000060842-RA Flavonoid IFS medium borderline
PITA_000060916-RA Flavonoid IFS low borderline
PITA_000060974-RA Flavonoid IFS medium borderline
PITA_000061060-RA Flavonoid IFS medium borderline
PITA_000061339-RA Flavonoid IFS low borderline
PITA_000061779-RA Flavonoid IFS medium borderline
PITA_000061881-RA Flavonoid IFS low borderline
PITA_000061979-RA Flavonoid IFS medium borderline
PITA_000062097-RA Flavonoid IFS low borderline
PITA_000062098-RA Flavonoid IFS medium pass
PITA_000062297-RA Flavonoid IFS low borderline
PITA_000063225-RA Flavonoid IFS low borderline
PITA_000063320-RA Flavonoid IFS low borderline
PITA_000063323-RA Flavonoid IFS medium borderline
PITA_000063500-RA Flavonoid IFS low borderline
PITA_000063635-RA Flavonoid IFS low borderline
PITA_000063702-RA Flavonoid IFS medium borderline
PITA_000063703-RA Flavonoid IFS low borderline
PITA_000063779-RA Flavonoid IFS low borderline
PITA_000063794-RA Flavonoid IFS medium borderline
PITA_000064036-RA Flavonoid IFS medium borderline
PITA_000064037-RA Flavonoid IFS medium borderline
PITA_000064038-RA Flavonoid IFS medium borderline