PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
PITA_000064287-RA Flavonoid IFS medium borderline
PITA_000064329-RA Flavonoid IFS medium borderline
PITA_000064624-RA Flavonoid IFS low borderline
PITA_000064652-RA Flavonoid IFS low borderline
PITA_000064653-RA Flavonoid IFS low borderline
PITA_000064655-RA Flavonoid IFS low borderline
PITA_000065244-RA Flavonoid IFS low borderline
PITA_000065262-RA Flavonoid IFS low borderline
PITA_000065425-RA Flavonoid IFS low borderline
PITA_000065515-RA Flavonoid IFS low borderline
PITA_000065529-RA Flavonoid IFS low borderline
PITA_000065711-RA Flavonoid IFS medium borderline
PITA_000065883-RA Flavonoid IFS medium borderline
PITA_000066018-RA Flavonoid IFS low borderline
PITA_000066400-RA Flavonoid IFS medium borderline
PITA_000066506-RA Flavonoid IFS medium borderline
PITA_000067031-RA Flavonoid IFS low borderline
PITA_000067401-RA Flavonoid IFS low borderline
PITA_000067444-RA Flavonoid IFS low borderline
PITA_000067882-RA Flavonoid IFS low borderline
PITA_000068125-RA Flavonoid IFS low borderline
PITA_000068394-RA Flavonoid IFS medium borderline
PITA_000068747-RA Flavonoid IFS low borderline
PITA_000068819-RA Flavonoid IFS medium borderline
PITA_000068976-RA Flavonoid IFS medium borderline
PITA_000069009-RA Flavonoid IFS medium borderline
PITA_000069200-RA Flavonoid IFS medium borderline
PITA_000069443-RA Flavonoid IFS low borderline
PITA_000069677-RA Flavonoid IFS medium borderline
PITA_000069823-RA Flavonoid IFS low borderline
PITA_000069824-RA Flavonoid IFS low borderline
PITA_000070154-RA Flavonoid IFS medium borderline
PITA_000070258-RA Flavonoid IFS medium borderline
PITA_000070301-RA Flavonoid IFS low borderline
PITA_000070329-RA Flavonoid IFS low borderline
PITA_000070750-RA Flavonoid IFS low borderline
PITA_000070787-RA Flavonoid IFS low borderline
PITA_000071810-RA Flavonoid IFS medium borderline
PITA_000072551-RA Flavonoid IFS low borderline
PITA_000072637-RA Flavonoid IFS medium borderline
PITA_000072652-RA Flavonoid IFS medium borderline
PITA_000072890-RA Flavonoid IFS low borderline
PITA_000073022-RA Flavonoid IFS medium borderline
PITA_000073622-RA Flavonoid IFS low borderline
PITA_000073637-RA Flavonoid IFS low borderline
PITA_000073980-RA Flavonoid IFS low borderline
PITA_000074050-RA Flavonoid IFS low borderline
PITA_000074153-RA Flavonoid IFS low borderline
PITA_000074201-RA Flavonoid IFS medium borderline
PITA_000074526-RA Flavonoid IFS low borderline