PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000074632-RA Flavonoid IFS low borderline
PITA_000074800-RA Flavonoid IFS medium borderline
PITA_000074888-RA Flavonoid IFS medium pass
PITA_000075114-RA Flavonoid IFS low borderline
PITA_000075141-RA Flavonoid IFS medium borderline
PITA_000075297-RA Flavonoid IFS medium borderline
PITA_000075416-RA Flavonoid IFS medium borderline
PITA_000075472-RA Flavonoid IFS medium borderline
PITA_000075585-RA Flavonoid IFS medium borderline
PITA_000075792-RA Flavonoid IFS low borderline
PITA_000076004-RA Flavonoid IFS low borderline
PITA_000076273-RA Flavonoid IFS medium borderline
PITA_000076444-RA Flavonoid IFS low borderline
PITA_000076682-RA Flavonoid IFS medium borderline
PITA_000076806-RA Flavonoid IFS low borderline
PITA_000076867-RA Flavonoid IFS low borderline
PITA_000077279-RA Flavonoid IFS low borderline
PITA_000077296-RA Flavonoid IFS medium borderline
PITA_000077318-RA Flavonoid IFS low borderline
PITA_000078538-RA Flavonoid IFS medium borderline
PITA_000078589-RA Flavonoid IFS medium borderline
PITA_000078752-RA Flavonoid IFS medium borderline
PITA_000079001-RA Flavonoid IFS low borderline
PITA_000079350-RA Flavonoid IFS low borderline
PITA_000079570-RA Flavonoid IFS low borderline
PITA_000080006-RA Flavonoid IFS medium borderline
PITA_000080128-RA Flavonoid IFS medium borderline
PITA_000080656-RA Flavonoid IFS low borderline
PITA_000081015-RA Flavonoid IFS medium borderline
PITA_000081074-RA Flavonoid IFS low borderline
PITA_000081211-RA Flavonoid IFS medium borderline
PITA_000081550-RA Flavonoid IFS medium borderline
PITA_000081694-RA Flavonoid IFS low borderline
PITA_000081720-RA Flavonoid IFS medium borderline
PITA_000081737-RA Flavonoid IFS low borderline
PITA_000081970-RA Flavonoid IFS medium borderline
PITA_000082027-RA Flavonoid IFS low borderline
PITA_000082167-RA Flavonoid IFS low borderline
PITA_000082505-RA Flavonoid IFS low borderline
PITA_000082543-RA Flavonoid IFS low borderline
PITA_000082589-RA Flavonoid IFS low borderline
PITA_000082618-RA Flavonoid IFS low borderline
PITA_000082779-RA Flavonoid IFS low borderline
PITA_000082851-RA Flavonoid IFS medium borderline
PITA_000082898-RA Flavonoid IFS low borderline
PITA_000084007-RA Flavonoid IFS low borderline
PITA_000084135-RA Flavonoid IFS medium borderline
PITA_000084304-RA Flavonoid IFS low borderline
PITA_000084550-RA Flavonoid IFS low borderline
PITA_000084551-RA Flavonoid IFS medium borderline