PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000084733-RA Flavonoid IFS low borderline
PITA_000084995-RA Flavonoid IFS low borderline
PITA_000085267-RA Flavonoid IFS medium borderline
PITA_000085469-RA Flavonoid IFS low borderline
PITA_000085580-RA Flavonoid IFS medium borderline
PITA_000086040-RA Flavonoid IFS medium borderline
PITA_000086235-RA Flavonoid IFS medium borderline
PITA_000086303-RA Flavonoid IFS low borderline
PITA_000086372-RA Flavonoid IFS low borderline
PITA_000086373-RA Flavonoid IFS low borderline
PITA_000086429-RA Flavonoid IFS low borderline
PITA_000086811-RA Flavonoid IFS low borderline
PITA_000086845-RA Flavonoid IFS low borderline
PITA_000087463-RA Flavonoid IFS medium borderline
PITA_000087765-RA Flavonoid IFS medium borderline
PITA_000087766-RA Flavonoid IFS medium borderline
PITA_000087768-RA Flavonoid IFS low borderline
PITA_000087856-RA Flavonoid IFS medium borderline
PITA_000088259-RA Flavonoid IFS low borderline
PITA_000088292-RA Flavonoid IFS low borderline
PITA_000088442-RA Flavonoid IFS low borderline
PITA_000089025-RA Flavonoid IFS low borderline
PITA_000089385-RA Flavonoid IFS low borderline
PITA_000089675-RA Flavonoid IFS medium borderline
PITA_000089858-RA Flavonoid IFS low borderline
PITA_000089892-RA Flavonoid IFS low borderline
PITA_000090431-RA Flavonoid IFS medium borderline
PITA_000090633-RA Flavonoid IFS low borderline
PITA_000090721-RA Flavonoid IFS medium borderline
PITA_000090756-RA Flavonoid IFS low borderline
PITA_000090772-RA Flavonoid IFS low borderline
PITA_000090860-RA Flavonoid IFS low borderline
PITA_000091067-RA Flavonoid IFS low borderline
PITA_000091203-RA Flavonoid IFS medium borderline
PITA_000091262-RA Flavonoid IFS low borderline
PITA_000091281-RA Flavonoid IFS low borderline
PITA_000091346-RA Flavonoid IFS low borderline
PITA_000091378-RA Flavonoid IFS low borderline
PITA_000091630-RA Flavonoid IFS low borderline
PITA_000091810-RA Flavonoid IFS medium borderline
PITA_000091868-RA Flavonoid IFS medium borderline
PITA_000091869-RA Flavonoid IFS medium borderline
PITA_000091958-RA Flavonoid IFS medium borderline
PITA_000092039-RA Flavonoid IFS low borderline
PITA_000092170-RA Flavonoid IFS medium borderline
PITA_000092307-RA Flavonoid IFS low borderline
PITA_000092686-RA Flavonoid IFS medium borderline
PITA_000092718-RA Flavonoid IFS medium borderline
PITA_000092983-RA Flavonoid IFS medium borderline
PITA_000093044-RA Flavonoid IFS low borderline