PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
PITA_000013211-RA Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
PITA_000013212-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000013496-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000014816-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000014818-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000014820-RA Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
PITA_000015837-RA Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
PITA_000016546-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000016549-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000016570-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000016656-RA Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
PITA_000016657-RA Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
PITA_000016775-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000017859-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000017937-RA Phenylpropanoid LAC low borderline LAC__00002__sp_O81081_LAC2_ARATH
PITA_000018180-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000018909-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000018912-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000019376-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000020613-RA Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
PITA_000020903-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000021409-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000023836-RA Phenylpropanoid LAC low borderline LAC__00002__sp_O81081_LAC2_ARATH
PITA_000023837-RA Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
PITA_000025831-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000025832-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000026234-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000027640-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000027842-RA Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
PITA_000028863-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000029156-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000030129-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000030306-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000030307-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000030351-RA Phenylpropanoid LAC low borderline LAC__00002__sp_O81081_LAC2_ARATH
PITA_000030461-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000031859-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000032391-RA Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH
PITA_000032746-RA Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
PITA_000032748-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000033551-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000034469-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000034470-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000035022-RA Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
PITA_000037142-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000038151-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000038551-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000038552-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000039218-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000039219-RA Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH