PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000039220-RA Phenylpropanoid LAC medium pass
PITA_000039335-RA Phenylpropanoid LAC medium pass
PITA_000039337-RA Phenylpropanoid LAC low borderline
PITA_000039724-RA Phenylpropanoid LAC medium pass
PITA_000040379-RA Phenylpropanoid LAC medium pass
PITA_000040969-RA Phenylpropanoid LAC low borderline
PITA_000040976-RA Phenylpropanoid LAC medium pass
PITA_000041823-RA Phenylpropanoid LAC medium pass
PITA_000044734-RA Phenylpropanoid LAC medium pass
PITA_000045389-RA Phenylpropanoid LAC medium pass
PITA_000046336-RA Phenylpropanoid LAC medium pass
PITA_000046880-RA Phenylpropanoid LAC medium pass
PITA_000046881-RA Phenylpropanoid LAC medium pass
PITA_000048421-RA Phenylpropanoid LAC medium pass
PITA_000048572-RA Phenylpropanoid LAC low borderline
PITA_000049783-RA Phenylpropanoid LAC medium pass
PITA_000049859-RA Phenylpropanoid LAC medium pass
PITA_000050649-RA Phenylpropanoid LAC medium pass
PITA_000050744-RA Phenylpropanoid LAC medium pass
PITA_000050977-RA Phenylpropanoid LAC medium pass
PITA_000050978-RA Phenylpropanoid LAC medium pass
PITA_000051026-RA Phenylpropanoid LAC medium pass
PITA_000051698-RA Phenylpropanoid LAC medium pass
PITA_000052748-RA Phenylpropanoid LAC medium pass
PITA_000052750-RA Phenylpropanoid LAC low borderline
PITA_000053190-RA Phenylpropanoid LAC low borderline
PITA_000053202-RA Phenylpropanoid LAC medium pass
PITA_000053410-RA Phenylpropanoid LAC medium pass
PITA_000053786-RA Phenylpropanoid LAC medium pass
PITA_000054288-RA Phenylpropanoid LAC medium pass
PITA_000054328-RA Phenylpropanoid LAC medium pass
PITA_000055267-RA Phenylpropanoid LAC low borderline
PITA_000055716-RA Phenylpropanoid LAC medium pass
PITA_000055742-RA Phenylpropanoid LAC medium pass
PITA_000056258-RA Phenylpropanoid LAC medium pass
PITA_000056569-RA Phenylpropanoid LAC medium pass
PITA_000057269-RA Phenylpropanoid LAC medium pass
PITA_000057485-RA Phenylpropanoid LAC medium pass
PITA_000058148-RA Phenylpropanoid LAC medium pass
PITA_000058554-RA Phenylpropanoid LAC medium pass
PITA_000058556-RA Phenylpropanoid LAC medium pass
PITA_000059086-RA Phenylpropanoid LAC medium pass
PITA_000059087-RA Phenylpropanoid LAC medium pass
PITA_000061076-RA Phenylpropanoid LAC medium pass
PITA_000061322-RA Phenylpropanoid LAC medium pass
PITA_000062831-RA Phenylpropanoid LAC medium pass
PITA_000064183-RA Phenylpropanoid LAC medium pass
PITA_000064622-RA Phenylpropanoid LAC medium pass
PITA_000064728-RA Phenylpropanoid LAC low borderline
PITA_000064729-RA Phenylpropanoid LAC medium pass