PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000047220-RA Flavonoid PAL low borderline
PITA_000047899-RA Flavonoid PAL low borderline
PITA_000049303-RA Flavonoid PAL low borderline
PITA_000056344-RA Flavonoid PAL low borderline
PITA_000057642-RA Flavonoid PAL high pass
PITA_000064080-RA Flavonoid PAL low borderline
PITA_000065366-RA Flavonoid PAL high pass
PITA_000067816-RA Flavonoid PAL low borderline
PITA_000072028-RA Flavonoid PAL low borderline
PITA_000074853-RA Flavonoid PAL high pass
PITA_000074958-RA Flavonoid PAL medium pass
PITA_000075110-RA Flavonoid PAL high pass
PITA_000077002-RA Flavonoid PAL high pass
PITA_000078355-RA Flavonoid PAL high pass
PITA_000079302-RA Flavonoid PAL medium pass
PITA_000079303-RA Flavonoid PAL low borderline
PITA_000079629-RA Flavonoid PAL high pass
PITA_000080150-RA Flavonoid PAL medium pass
PITA_000080473-RA Flavonoid PAL high pass
PITA_000082179-RA Flavonoid PAL high pass
PITA_000086462-RA Flavonoid PAL high pass
PITA_000093606-RA Flavonoid PAL high pass
PITA_000094991-RA Flavonoid PAL medium pass
PITA_000094992-RA Flavonoid PAL high pass
PITA_000095146-RA Flavonoid PAL medium pass
PITA_000095762-RA Flavonoid PAL medium pass
PITA_000096539-RA Flavonoid PAL medium pass
PITA_000096540-RA Flavonoid PAL high pass
PITA_000096541-RA Flavonoid PAL medium pass
1A_I11_NT_comp49445_c0_seq3|m.4479.mrna1 Flavonoid UFGT medium pass
1A_all_VO_L_10621_T_8/20|m.2398.mrna1 Flavonoid UFGT high pass
1A_all_VO_L_5517_T_887/930|m.2020.mrna1 Flavonoid UFGT high pass
2A_I4_VO_L_831_T_41/65|m.26747.mrna1 Flavonoid UFGT medium pass
3A_I19_VO_L_1_T_135982/241978|m.34819.mrna1 Flavonoid UFGT high pass
5A_I16_VO_L_3074_T_89/89|m.49426.mrna2 Flavonoid UFGT high pass
5A_I16_VO_L_4_T_65838/214906|m.48071.mrna1 Flavonoid UFGT high pass
6A_I23_NT_comp44453_c0_seq2|m.58668.mrna1 Flavonoid UFGT medium pass
PITA_000000003-RA Flavonoid UFGT medium pass
PITA_000000004-RA Flavonoid UFGT high pass
PITA_000000276-RA Flavonoid UFGT high pass
PITA_000000385-RA Flavonoid UFGT medium pass
PITA_000000673-RA Flavonoid UFGT high pass
PITA_000000695-RA Flavonoid UFGT low borderline
PITA_000000941-RA Flavonoid UFGT low borderline
PITA_000001275-RA Flavonoid UFGT medium pass
PITA_000001285-RA Flavonoid UFGT high pass
PITA_000001286-RA Flavonoid UFGT medium pass
PITA_000001287-RA Flavonoid UFGT high pass
PITA_000001288-RA Flavonoid UFGT high pass
PITA_000001299-RA Flavonoid UFGT medium pass