PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000001305-RA Flavonoid UFGT medium pass
PITA_000001645-RA Flavonoid UFGT high pass
PITA_000002710-RA Flavonoid UFGT high pass
PITA_000003434-RA Flavonoid UFGT high pass
PITA_000003505-RA Flavonoid UFGT medium pass
PITA_000003789-RA Flavonoid UFGT medium pass
PITA_000004391-RA Flavonoid UFGT high pass
PITA_000006175-RA Flavonoid UFGT high pass
PITA_000006739-RA Flavonoid UFGT high pass
PITA_000008221-RA Flavonoid UFGT high pass
PITA_000009154-RA Flavonoid UFGT medium pass
PITA_000009157-RA Flavonoid UFGT medium pass
PITA_000009396-RA Flavonoid UFGT low borderline
PITA_000010329-RA Flavonoid UFGT high pass
PITA_000010599-RA Flavonoid UFGT high pass
PITA_000011382-RA Flavonoid UFGT low borderline
PITA_000011693-RA Flavonoid UFGT medium pass
PITA_000011696-RA Flavonoid UFGT medium pass
PITA_000011698-RA Flavonoid UFGT medium pass
PITA_000011699-RA Flavonoid UFGT high pass
PITA_000011895-RA Flavonoid UFGT low borderline
PITA_000011896-RA Flavonoid UFGT low borderline
PITA_000012599-RA Flavonoid UFGT high pass
PITA_000013003-RA Flavonoid UFGT medium pass
PITA_000013163-RA Flavonoid UFGT high pass
PITA_000013217-RA Flavonoid UFGT medium pass
PITA_000013356-RA Flavonoid UFGT high pass
PITA_000013681-RA Flavonoid UFGT high pass
PITA_000014467-RA Flavonoid UFGT medium pass
PITA_000014566-RA Flavonoid UFGT high pass
PITA_000014574-RA Flavonoid UFGT high pass
PITA_000014594-RA Flavonoid UFGT medium pass
PITA_000014598-RA Flavonoid UFGT low borderline
PITA_000015264-RA Flavonoid UFGT high pass
PITA_000015764-RA Flavonoid UFGT high pass
PITA_000015765-RA Flavonoid UFGT high pass
PITA_000016479-RA Flavonoid UFGT high pass
PITA_000016680-RA Flavonoid UFGT low borderline
PITA_000016681-RA Flavonoid UFGT medium pass
PITA_000016686-RA Flavonoid UFGT low borderline
PITA_000016835-RA Flavonoid UFGT medium pass
PITA_000016840-RA Flavonoid UFGT medium pass
PITA_000016841-RA Flavonoid UFGT low borderline
PITA_000017223-RA Flavonoid UFGT high pass
PITA_000017645-RA Flavonoid UFGT medium pass
PITA_000019307-RA Flavonoid UFGT medium pass
PITA_000020010-RA Flavonoid UFGT medium pass
PITA_000020213-RA Flavonoid UFGT high pass
PITA_000020941-RA Flavonoid UFGT low borderline
PITA_000021881-RA Flavonoid UFGT high pass