PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000012383-RA Flavonoid ANR low borderline
PITA_000012804-RA Flavonoid ANR medium borderline
PITA_000013625-RA Flavonoid ANR medium borderline
PITA_000013626-RA Flavonoid ANR medium borderline
PITA_000014275-RA Flavonoid ANR medium borderline
PITA_000014276-RA Flavonoid ANR medium borderline
PITA_000019563-RA Flavonoid ANR low borderline
PITA_000020470-RA Flavonoid ANR medium borderline
PITA_000021541-RA Flavonoid ANR low borderline
PITA_000021543-RA Flavonoid ANR medium pass
PITA_000022253-RA Flavonoid ANR medium borderline
PITA_000023786-RA Flavonoid ANR low borderline
PITA_000023878-RA Flavonoid ANR low borderline
PITA_000025526-RA Flavonoid ANR medium borderline
PITA_000026639-RA Flavonoid ANR low borderline
PITA_000028028-RA Flavonoid ANR medium borderline
PITA_000028029-RA Flavonoid ANR medium borderline
PITA_000031807-RA Flavonoid ANR low borderline
PITA_000031871-RA Flavonoid ANR medium borderline
PITA_000033010-RA Flavonoid ANR medium borderline
PITA_000033469-RA Flavonoid ANR medium borderline
PITA_000033470-RA Flavonoid ANR low borderline
PITA_000033999-RA Flavonoid ANR medium borderline
PITA_000035531-RA Flavonoid ANR medium borderline
PITA_000035822-RA Flavonoid ANR medium borderline
PITA_000038415-RA Flavonoid ANR low borderline
PITA_000044263-RA Flavonoid ANR medium borderline
PITA_000044264-RA Flavonoid ANR medium borderline
PITA_000045255-RA Flavonoid ANR medium pass
PITA_000045897-RA Flavonoid ANR medium borderline
PITA_000047388-RA Flavonoid ANR medium borderline
PITA_000051225-RA Flavonoid ANR low borderline
PITA_000051398-RA Flavonoid ANR medium pass
PITA_000054918-RA Flavonoid ANR medium borderline
PITA_000055104-RA Flavonoid ANR low borderline
PITA_000055403-RA Flavonoid ANR medium borderline
PITA_000056542-RA Flavonoid ANR medium borderline
PITA_000057627-RA Flavonoid ANR low borderline
PITA_000057915-RA Flavonoid ANR medium borderline
PITA_000058139-RA Flavonoid ANR low borderline
PITA_000060431-RA Flavonoid ANR low borderline
PITA_000060433-RA Flavonoid ANR medium pass
PITA_000062962-RA Flavonoid ANR medium borderline
PITA_000063219-RA Flavonoid ANR low borderline
PITA_000063263-RA Flavonoid ANR medium pass
PITA_000063913-RA Flavonoid ANR medium borderline
PITA_000068488-RA Flavonoid ANR medium borderline
PITA_000069565-RA Flavonoid ANR medium borderline
PITA_000070509-RA Flavonoid ANR medium pass
PITA_000070676-RA Flavonoid ANR medium pass