PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000071597-RA Flavonoid ANR low borderline
PITA_000072203-RA Flavonoid ANR medium borderline
PITA_000072406-RA Flavonoid ANR medium borderline
PITA_000082988-RA Flavonoid ANR medium borderline
PITA_000084015-RA Flavonoid ANR medium borderline
PITA_000084659-RA Flavonoid ANR medium borderline
PITA_000086473-RA Flavonoid ANR low borderline
PITA_000087769-RA Flavonoid ANR medium borderline
PITA_000088562-RA Flavonoid ANR medium borderline
PITA_000090836-RA Flavonoid ANR medium borderline
PITA_000091590-RA Flavonoid ANR medium borderline
PITA_000091771-RA Flavonoid ANR medium borderline
PITA_000093193-RA Flavonoid ANR low borderline
PITA_000093713-RA Flavonoid ANR medium borderline
PITAhm_001141-RA Flavonoid ANR low borderline
PITAhm_001717-RA Flavonoid ANR medium borderline
PITAhm_001752-RA Flavonoid ANR medium borderline
PITA_000000222-RA Flavonoid ANS/LDOX low borderline
PITA_000001661-RA Flavonoid ANS/LDOX medium pass
PITA_000002509-RA Flavonoid ANS/LDOX medium borderline
PITA_000002510-RA Flavonoid ANS/LDOX medium pass
PITA_000005097-RA Flavonoid ANS/LDOX medium borderline
PITA_000005982-RA Flavonoid ANS/LDOX low borderline
PITA_000006295-RA Flavonoid ANS/LDOX medium pass
PITA_000007494-RA Flavonoid ANS/LDOX medium pass
PITA_000008291-RA Flavonoid ANS/LDOX low borderline
PITA_000015494-RA Flavonoid ANS/LDOX medium borderline
PITA_000015936-RA Flavonoid ANS/LDOX low borderline
PITA_000016687-RA Flavonoid ANS/LDOX medium borderline
PITA_000017011-RA Flavonoid ANS/LDOX medium borderline
PITA_000026550-RA Flavonoid ANS/LDOX medium pass
PITA_000027992-RA Flavonoid ANS/LDOX medium pass
PITA_000028525-RA Flavonoid ANS/LDOX low borderline
PITA_000029236-RA Flavonoid ANS/LDOX medium borderline
PITA_000029856-RA Flavonoid ANS/LDOX medium borderline
PITA_000032957-RA Flavonoid ANS/LDOX medium borderline
PITA_000039748-RA Flavonoid ANS/LDOX medium pass
PITA_000040135-RA Flavonoid ANS/LDOX medium pass
PITA_000040503-RA Flavonoid ANS/LDOX low borderline
PITA_000041219-RA Flavonoid ANS/LDOX medium borderline
PITA_000043341-RA Flavonoid ANS/LDOX low borderline
PITA_000045976-RA Flavonoid ANS/LDOX medium pass
PITA_000052261-RA Flavonoid ANS/LDOX medium borderline
PITA_000052796-RA Flavonoid ANS/LDOX medium borderline
PITA_000053188-RA Flavonoid ANS/LDOX low borderline
PITA_000053427-RA Flavonoid ANS/LDOX medium pass
PITA_000053947-RA Flavonoid ANS/LDOX medium borderline
PITA_000054543-RA Flavonoid ANS/LDOX medium borderline
PITA_000054789-RA Flavonoid ANS/LDOX low borderline
PITA_000055728-RA Flavonoid ANS/LDOX medium pass