PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000059058-RA Flavonoid ANS/LDOX medium borderline
PITA_000059221-RA Flavonoid ANS/LDOX medium pass
PITA_000062139-RA Flavonoid ANS/LDOX medium pass
PITA_000064113-RA Flavonoid ANS/LDOX medium borderline
PITA_000064234-RA Flavonoid ANS/LDOX medium borderline
PITA_000066963-RA Flavonoid ANS/LDOX medium borderline
PITA_000066985-RA Flavonoid ANS/LDOX medium borderline
PITA_000067166-RA Flavonoid ANS/LDOX medium borderline
PITA_000067532-RA Flavonoid ANS/LDOX medium pass
PITA_000069352-RA Flavonoid ANS/LDOX low borderline
PITA_000069758-RA Flavonoid ANS/LDOX medium pass
PITA_000071105-RA Flavonoid ANS/LDOX medium borderline
PITA_000071145-RA Flavonoid ANS/LDOX low borderline
PITA_000071772-RA Flavonoid ANS/LDOX medium pass
PITA_000072204-RA Flavonoid ANS/LDOX medium borderline
PITA_000072496-RA Flavonoid ANS/LDOX low borderline
PITA_000073248-RA Flavonoid ANS/LDOX medium borderline
PITA_000075975-RA Flavonoid ANS/LDOX low borderline
PITA_000077295-RA Flavonoid ANS/LDOX medium borderline
PITA_000077573-RA Flavonoid ANS/LDOX medium borderline
PITA_000077686-RA Flavonoid ANS/LDOX medium borderline
PITA_000078357-RA Flavonoid ANS/LDOX medium pass
PITA_000078409-RA Flavonoid ANS/LDOX medium pass
PITA_000078899-RA Flavonoid ANS/LDOX low borderline
PITA_000079633-RA Flavonoid ANS/LDOX medium pass
PITA_000080038-RA Flavonoid ANS/LDOX low borderline
PITA_000080525-RA Flavonoid ANS/LDOX medium borderline
PITA_000081762-RA Flavonoid ANS/LDOX medium borderline
PITA_000083096-RA Flavonoid ANS/LDOX medium pass
PITA_000084076-RA Flavonoid ANS/LDOX medium borderline
PITA_000084737-RA Flavonoid ANS/LDOX medium borderline
PITA_000085828-RA Flavonoid ANS/LDOX medium pass
PITA_000087712-RA Flavonoid ANS/LDOX medium pass
PITA_000089271-RA Flavonoid ANS/LDOX medium pass
PITA_000089740-RA Flavonoid ANS/LDOX low borderline
PITA_000089770-RA Flavonoid ANS/LDOX medium borderline
PITA_000093646-RA Flavonoid ANS/LDOX medium borderline
PITA_000093760-RA Flavonoid ANS/LDOX medium borderline
PITA_000094467-RA Flavonoid ANS/LDOX medium borderline
PITA_000095422-RA Flavonoid ANS/LDOX medium borderline
PITA_000000899-RA Flavonoid C4H medium borderline
PITA_000001426-RA Flavonoid C4H low borderline
PITA_000007972-RA Flavonoid C4H medium borderline
PITA_000009197-RA Flavonoid C4H low borderline
PITA_000019040-RA Flavonoid C4H medium borderline
PITA_000025417-RA Flavonoid C4H medium pass
PITA_000029497-RA Flavonoid C4H low borderline
PITA_000029638-RA Flavonoid C4H low borderline
PITA_000031376-RA Flavonoid C4H medium borderline
PITA_000032079-RA Flavonoid C4H medium borderline