PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000052144-RA Flavonoid C4H medium borderline
PITA_000057405-RA Flavonoid C4H medium borderline
PITA_000058705-RA Flavonoid C4H low borderline
PITA_000065148-RA Flavonoid C4H low borderline
PITA_000065196-RA Flavonoid C4H low borderline
PITA_000065709-RA Flavonoid C4H medium pass
PITA_000068974-RA Flavonoid C4H low borderline
PITA_000071640-RA Flavonoid C4H low borderline
PITA_000072351-RA Flavonoid C4H medium pass
PITA_000077664-RA Flavonoid C4H medium borderline
PITA_000082129-RA Flavonoid C4H low borderline
PITA_000088153-RA Flavonoid C4H low borderline
PITA_000089206-RA Flavonoid C4H low borderline
PITA_000094808-RA Flavonoid C4H low borderline
PITA_000001781-RA Flavonoid CHI medium pass
PITA_000008855-RA Flavonoid CHI medium pass
PITA_000010201-RA Flavonoid CHI medium pass
PITA_000015741-RA Flavonoid CHI medium pass
PITA_000019617-RA Flavonoid CHI low borderline
PITA_000034482-RA Flavonoid CHI medium pass
PITA_000034483-RA Flavonoid CHI medium pass
PITA_000041920-RA Flavonoid CHI low borderline
PITA_000047670-RA Flavonoid CHI low borderline
PITA_000052590-RA Flavonoid CHI medium pass
PITA_000053350-RA Flavonoid CHI low borderline
PITA_000056281-RA Flavonoid CHI medium pass
PITA_000057589-RA Flavonoid CHI medium pass
PITA_000060968-RA Flavonoid CHI low borderline
PITA_000065612-RA Flavonoid CHI medium pass
PITA_000071717-RA Flavonoid CHI medium pass
PITA_000073805-RA Flavonoid CHI low borderline
PITA_000076113-RA Flavonoid CHI medium pass
PITA_000076872-RA Flavonoid CHI medium pass
PITA_000079473-RA Flavonoid CHI medium pass
PITA_000087740-RA Flavonoid CHI low borderline
PITA_000090131-RA Flavonoid CHI medium pass
PITA_000092133-RA Flavonoid CHI medium pass
PITA_000092437-RA Flavonoid CHI low borderline
PITA_000005290-RA Flavonoid CHS medium pass
PITA_000006106-RA Flavonoid CHS medium pass
PITA_000006631-RA Flavonoid CHS medium pass
PITA_000007571-RA Flavonoid CHS low borderline
PITA_000007991-RA Flavonoid CHS medium pass
PITA_000014977-RA Flavonoid CHS medium pass
PITA_000015419-RA Flavonoid CHS medium pass
PITA_000017127-RA Flavonoid CHS medium pass
PITA_000017128-RA Flavonoid CHS medium pass
PITA_000018216-RA Flavonoid CHS medium pass
PITA_000018217-RA Flavonoid CHS medium pass
PITA_000018218-RA Flavonoid CHS medium pass