PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000008681-RA Rosmarinic Acid C4H medium pass
PITA_000008695-RA Rosmarinic Acid C4H low borderline
PITA_000009191-RA Rosmarinic Acid C4H medium pass
PITA_000009197-RA Rosmarinic Acid C4H low borderline
PITA_000010136-RA Rosmarinic Acid C4H medium pass
PITA_000010256-RA Rosmarinic Acid C4H low borderline
PITA_000010257-RA Rosmarinic Acid C4H low borderline
PITA_000010264-RA Rosmarinic Acid C4H medium pass
PITA_000010362-RA Rosmarinic Acid C4H low borderline
PITA_000010363-RA Rosmarinic Acid C4H medium pass
PITA_000010409-RA Rosmarinic Acid C4H medium pass
PITA_000010799-RA Rosmarinic Acid C4H low borderline
PITA_000010839-RA Rosmarinic Acid C4H low borderline
PITA_000010840-RA Rosmarinic Acid C4H medium pass
PITA_000011084-RA Rosmarinic Acid C4H low borderline
PITA_000011482-RA Rosmarinic Acid C4H low borderline
PITA_000012112-RA Rosmarinic Acid C4H medium pass
PITA_000012113-RA Rosmarinic Acid C4H medium pass
PITA_000012639-RA Rosmarinic Acid C4H medium pass
PITA_000013490-RA Rosmarinic Acid C4H low borderline
PITA_000015505-RA Rosmarinic Acid C4H low borderline
PITA_000015506-RA Rosmarinic Acid C4H low borderline
PITA_000015650-RA Rosmarinic Acid C4H medium pass
PITA_000015915-RA Rosmarinic Acid C4H low borderline
PITA_000016127-RA Rosmarinic Acid C4H low borderline
PITA_000017562-RA Rosmarinic Acid C4H low borderline
PITA_000018199-RA Rosmarinic Acid C4H low borderline
PITA_000019010-RA Rosmarinic Acid C4H low borderline
PITA_000019034-RA Rosmarinic Acid C4H low borderline
PITA_000019040-RA Rosmarinic Acid C4H medium pass
PITA_000019042-RA Rosmarinic Acid C4H low borderline
PITA_000019446-RA Rosmarinic Acid C4H low borderline
PITA_000019693-RA Rosmarinic Acid C4H low borderline
PITA_000020244-RA Rosmarinic Acid C4H low borderline
PITA_000020245-RA Rosmarinic Acid C4H low borderline
PITA_000020637-RA Rosmarinic Acid C4H low borderline
PITA_000021078-RA Rosmarinic Acid C4H low borderline
PITA_000022034-RA Rosmarinic Acid C4H low borderline
PITA_000022145-RA Rosmarinic Acid C4H low borderline
PITA_000022231-RA Rosmarinic Acid C4H medium pass
PITA_000022232-RA Rosmarinic Acid C4H low borderline
PITA_000022455-RA Rosmarinic Acid C4H low borderline
PITA_000022456-RA Rosmarinic Acid C4H low borderline
PITA_000022846-RA Rosmarinic Acid C4H low borderline
PITA_000023051-RA Rosmarinic Acid C4H low borderline
PITA_000023229-RA Rosmarinic Acid C4H low borderline
PITA_000023275-RA Rosmarinic Acid C4H low borderline
PITA_000023499-RA Rosmarinic Acid C4H medium pass
PITA_000023806-RA Rosmarinic Acid C4H medium pass
PITA_000023808-RA Rosmarinic Acid C4H medium pass