PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000032770-RA Rosmarinic Acid C4H low borderline
PITA_000032929-RA Rosmarinic Acid C4H low borderline
PITA_000032932-RA Rosmarinic Acid C4H low borderline
PITA_000032933-RA Rosmarinic Acid C4H low borderline
PITA_000033586-RA Rosmarinic Acid C4H low borderline
PITA_000033587-RA Rosmarinic Acid C4H low borderline
PITA_000033627-RA Rosmarinic Acid C4H low borderline
PITA_000034050-RA Rosmarinic Acid C4H low borderline
PITA_000034158-RA Rosmarinic Acid C4H medium pass
PITA_000034815-RA Rosmarinic Acid C4H low borderline
PITA_000035695-RA Rosmarinic Acid C4H low borderline
PITA_000035716-RA Rosmarinic Acid C4H low borderline
PITA_000035717-RA Rosmarinic Acid C4H low borderline
PITA_000036127-RA Rosmarinic Acid C4H low borderline
PITA_000036203-RA Rosmarinic Acid C4H low borderline
PITA_000036291-RA Rosmarinic Acid C4H medium pass
PITA_000037316-RA Rosmarinic Acid C4H low borderline
PITA_000037777-RA Rosmarinic Acid C4H low borderline
PITA_000037899-RA Rosmarinic Acid C4H low borderline
PITA_000038318-RA Rosmarinic Acid C4H low borderline
PITA_000038416-RA Rosmarinic Acid C4H low borderline
PITA_000038519-RA Rosmarinic Acid C4H low borderline
PITA_000038593-RA Rosmarinic Acid C4H medium pass
PITA_000038705-RA Rosmarinic Acid C4H low borderline
PITA_000038706-RA Rosmarinic Acid C4H medium pass
PITA_000038920-RA Rosmarinic Acid C4H low borderline
PITA_000039216-RA Rosmarinic Acid C4H low borderline
PITA_000039553-RA Rosmarinic Acid C4H low borderline
PITA_000039712-RA Rosmarinic Acid C4H low borderline
PITA_000039713-RA Rosmarinic Acid C4H low borderline
PITA_000040187-RA Rosmarinic Acid C4H low borderline
PITA_000040347-RA Rosmarinic Acid C4H low borderline
PITA_000040627-RA Rosmarinic Acid C4H low borderline
PITA_000041624-RA Rosmarinic Acid C4H low borderline
PITA_000041890-RA Rosmarinic Acid C4H medium pass
PITA_000041936-RA Rosmarinic Acid C4H low borderline
PITA_000042162-RA Rosmarinic Acid C4H low borderline
PITA_000042245-RA Rosmarinic Acid C4H low borderline
PITA_000042435-RA Rosmarinic Acid C4H low borderline
PITA_000044249-RA Rosmarinic Acid C4H low borderline
PITA_000044373-RA Rosmarinic Acid C4H low borderline
PITA_000044847-RA Rosmarinic Acid C4H low borderline
PITA_000044925-RA Rosmarinic Acid C4H low borderline
PITA_000044926-RA Rosmarinic Acid C4H low borderline
PITA_000045152-RA Rosmarinic Acid C4H medium pass
PITA_000045298-RA Rosmarinic Acid C4H low borderline
PITA_000045701-RA Rosmarinic Acid C4H low borderline
PITA_000046083-RA Rosmarinic Acid C4H medium pass
PITA_000046305-RA Rosmarinic Acid C4H medium pass
PITA_000046792-RA Rosmarinic Acid C4H low borderline