PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000046806-RA Rosmarinic Acid C4H low borderline
PITA_000046984-RA Rosmarinic Acid C4H low borderline
PITA_000047329-RA Rosmarinic Acid C4H low borderline
PITA_000047521-RA Rosmarinic Acid C4H low borderline
PITA_000047816-RA Rosmarinic Acid C4H low borderline
PITA_000047962-RA Rosmarinic Acid C4H low borderline
PITA_000048213-RA Rosmarinic Acid C4H low borderline
PITA_000048237-RA Rosmarinic Acid C4H low borderline
PITA_000048238-RA Rosmarinic Acid C4H low borderline
PITA_000048290-RA Rosmarinic Acid C4H low borderline
PITA_000048309-RA Rosmarinic Acid C4H low borderline
PITA_000048611-RA Rosmarinic Acid C4H low borderline
PITA_000048760-RA Rosmarinic Acid C4H low borderline
PITA_000048874-RA Rosmarinic Acid C4H low borderline
PITA_000049421-RA Rosmarinic Acid C4H low borderline
PITA_000049425-RA Rosmarinic Acid C4H low borderline
PITA_000050039-RA Rosmarinic Acid C4H low borderline
PITA_000050040-RA Rosmarinic Acid C4H low borderline
PITA_000050286-RA Rosmarinic Acid C4H medium pass
PITA_000050799-RA Rosmarinic Acid C4H low borderline
PITA_000050800-RA Rosmarinic Acid C4H medium pass
PITA_000050805-RA Rosmarinic Acid C4H low borderline
PITA_000050806-RA Rosmarinic Acid C4H low borderline
PITA_000051216-RA Rosmarinic Acid C4H medium pass
PITA_000051217-RA Rosmarinic Acid C4H low borderline
PITA_000051239-RA Rosmarinic Acid C4H low borderline
PITA_000051298-RA Rosmarinic Acid C4H low borderline
PITA_000051299-RA Rosmarinic Acid C4H low borderline
PITA_000051367-RA Rosmarinic Acid C4H low borderline
PITA_000051406-RA Rosmarinic Acid C4H medium pass
PITA_000051433-RA Rosmarinic Acid C4H low borderline
PITA_000051443-RA Rosmarinic Acid C4H low borderline
PITA_000051675-RA Rosmarinic Acid C4H low borderline
PITA_000051869-RA Rosmarinic Acid C4H low borderline
PITA_000052144-RA Rosmarinic Acid C4H medium pass
PITA_000052592-RA Rosmarinic Acid C4H low borderline
PITA_000052927-RA Rosmarinic Acid C4H low borderline
PITA_000052928-RA Rosmarinic Acid C4H low borderline
PITA_000052929-RA Rosmarinic Acid C4H low borderline
PITA_000052955-RA Rosmarinic Acid C4H medium pass
PITA_000053114-RA Rosmarinic Acid C4H low borderline
PITA_000053270-RA Rosmarinic Acid C4H medium pass
PITA_000053316-RA Rosmarinic Acid C4H low borderline
PITA_000053544-RA Rosmarinic Acid C4H medium pass
PITA_000053894-RA Rosmarinic Acid C4H low borderline
PITA_000053952-RA Rosmarinic Acid C4H medium pass
PITA_000054034-RA Rosmarinic Acid C4H low borderline
PITA_000054036-RA Rosmarinic Acid C4H low borderline
PITA_000054037-RA Rosmarinic Acid C4H low borderline
PITA_000054286-RA Rosmarinic Acid C4H low borderline