PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000054409-RA Rosmarinic Acid C4H low borderline
PITA_000054771-RA Rosmarinic Acid C4H low borderline
PITA_000055336-RA Rosmarinic Acid C4H low borderline
PITA_000055498-RA Rosmarinic Acid C4H low borderline
PITA_000055517-RA Rosmarinic Acid C4H low borderline
PITA_000055651-RA Rosmarinic Acid C4H low borderline
PITA_000055788-RA Rosmarinic Acid C4H low borderline
PITA_000055794-RA Rosmarinic Acid C4H low borderline
PITA_000055813-RA Rosmarinic Acid C4H medium pass
PITA_000057114-RA Rosmarinic Acid C4H low borderline
PITA_000057115-RA Rosmarinic Acid C4H low borderline
PITA_000057135-RA Rosmarinic Acid C4H low borderline
PITA_000057153-RA Rosmarinic Acid C4H medium pass
PITA_000057179-RA Rosmarinic Acid C4H low borderline
PITA_000057180-RA Rosmarinic Acid C4H low borderline
PITA_000057181-RA Rosmarinic Acid C4H low borderline
PITA_000057182-RA Rosmarinic Acid C4H low borderline
PITA_000057353-RA Rosmarinic Acid C4H low borderline
PITA_000057402-RA Rosmarinic Acid C4H medium pass
PITA_000057405-RA Rosmarinic Acid C4H medium pass
PITA_000057462-RA Rosmarinic Acid C4H medium pass
PITA_000057497-RA Rosmarinic Acid C4H low borderline
PITA_000057647-RA Rosmarinic Acid C4H low borderline
PITA_000057948-RA Rosmarinic Acid C4H low borderline
PITA_000058072-RA Rosmarinic Acid C4H low borderline
PITA_000058201-RA Rosmarinic Acid C4H low borderline
PITA_000058385-RA Rosmarinic Acid C4H low borderline
PITA_000058398-RA Rosmarinic Acid C4H low borderline
PITA_000058409-RA Rosmarinic Acid C4H low borderline
PITA_000058705-RA Rosmarinic Acid C4H low borderline
PITA_000058857-RA Rosmarinic Acid C4H low borderline
PITA_000058864-RA Rosmarinic Acid C4H low borderline
PITA_000058968-RA Rosmarinic Acid C4H low borderline
PITA_000058988-RA Rosmarinic Acid C4H medium pass
PITA_000058989-RA Rosmarinic Acid C4H low borderline
PITA_000058990-RA Rosmarinic Acid C4H low borderline
PITA_000059173-RA Rosmarinic Acid C4H low borderline
PITA_000059418-RA Rosmarinic Acid C4H low borderline
PITA_000059825-RA Rosmarinic Acid C4H low borderline
PITA_000059899-RA Rosmarinic Acid C4H low borderline
PITA_000059947-RA Rosmarinic Acid C4H low borderline
PITA_000059993-RA Rosmarinic Acid C4H low borderline
PITA_000060242-RA Rosmarinic Acid C4H medium pass
PITA_000060286-RA Rosmarinic Acid C4H medium pass
PITA_000060494-RA Rosmarinic Acid C4H medium pass
PITA_000060495-RA Rosmarinic Acid C4H medium pass
PITA_000060496-RA Rosmarinic Acid C4H medium pass
PITA_000060684-RA Rosmarinic Acid C4H medium pass
PITA_000060831-RA Rosmarinic Acid C4H low borderline
PITA_000060835-RA Rosmarinic Acid C4H low borderline