PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000060836-RA Rosmarinic Acid C4H low borderline
PITA_000060842-RA Rosmarinic Acid C4H medium pass
PITA_000060857-RA Rosmarinic Acid C4H low borderline
PITA_000060916-RA Rosmarinic Acid C4H low borderline
PITA_000060974-RA Rosmarinic Acid C4H medium pass
PITA_000061060-RA Rosmarinic Acid C4H low borderline
PITA_000061339-RA Rosmarinic Acid C4H low borderline
PITA_000061414-RA Rosmarinic Acid C4H low borderline
PITA_000061416-RA Rosmarinic Acid C4H low borderline
PITA_000061729-RA Rosmarinic Acid C4H low borderline
PITA_000061779-RA Rosmarinic Acid C4H medium pass
PITA_000061815-RA Rosmarinic Acid C4H low borderline
PITA_000061881-RA Rosmarinic Acid C4H low borderline
PITA_000061894-RA Rosmarinic Acid C4H low borderline
PITA_000061979-RA Rosmarinic Acid C4H low borderline
PITA_000062097-RA Rosmarinic Acid C4H low borderline
PITA_000062098-RA Rosmarinic Acid C4H low borderline
PITA_000062146-RA Rosmarinic Acid C4H medium pass
PITA_000062408-RA Rosmarinic Acid C4H low borderline
PITA_000062453-RA Rosmarinic Acid C4H low borderline
PITA_000062529-RA Rosmarinic Acid C4H low borderline
PITA_000062884-RA Rosmarinic Acid C4H low borderline
PITA_000063232-RA Rosmarinic Acid C4H medium pass
PITA_000063320-RA Rosmarinic Acid C4H low borderline
PITA_000063635-RA Rosmarinic Acid C4H low borderline
PITA_000063702-RA Rosmarinic Acid C4H medium pass
PITA_000063779-RA Rosmarinic Acid C4H low borderline
PITA_000063794-RA Rosmarinic Acid C4H low borderline
PITA_000063856-RA Rosmarinic Acid C4H low borderline
PITA_000064037-RA Rosmarinic Acid C4H low borderline
PITA_000064038-RA Rosmarinic Acid C4H low borderline
PITA_000064287-RA Rosmarinic Acid C4H medium pass
PITA_000064329-RA Rosmarinic Acid C4H medium pass
PITA_000064615-RA Rosmarinic Acid C4H low borderline
PITA_000064624-RA Rosmarinic Acid C4H low borderline
PITA_000064652-RA Rosmarinic Acid C4H low borderline
PITA_000064653-RA Rosmarinic Acid C4H low borderline
PITA_000064714-RA Rosmarinic Acid C4H low borderline
PITA_000065148-RA Rosmarinic Acid C4H low borderline
PITA_000065194-RA Rosmarinic Acid C4H low borderline
PITA_000065196-RA Rosmarinic Acid C4H low borderline
PITA_000065244-RA Rosmarinic Acid C4H low borderline
PITA_000065515-RA Rosmarinic Acid C4H low borderline
PITA_000065529-RA Rosmarinic Acid C4H low borderline
PITA_000065709-RA Rosmarinic Acid C4H medium pass
PITA_000065711-RA Rosmarinic Acid C4H medium pass
PITA_000065815-RA Rosmarinic Acid C4H low borderline
PITA_000065883-RA Rosmarinic Acid C4H low borderline
PITA_000066400-RA Rosmarinic Acid C4H medium pass
PITA_000066506-RA Rosmarinic Acid C4H low borderline