PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000066648-RA Rosmarinic Acid C4H low borderline
PITA_000067892-RA Rosmarinic Acid C4H low borderline
PITA_000068394-RA Rosmarinic Acid C4H low borderline
PITA_000068412-RA Rosmarinic Acid C4H medium pass
PITA_000068747-RA Rosmarinic Acid C4H low borderline
PITA_000068819-RA Rosmarinic Acid C4H medium pass
PITA_000068973-RA Rosmarinic Acid C4H low borderline
PITA_000068974-RA Rosmarinic Acid C4H low borderline
PITA_000068976-RA Rosmarinic Acid C4H low borderline
PITA_000069009-RA Rosmarinic Acid C4H medium pass
PITA_000069067-RA Rosmarinic Acid C4H low borderline
PITA_000069088-RA Rosmarinic Acid C4H low borderline
PITA_000069089-RA Rosmarinic Acid C4H low borderline
PITA_000069200-RA Rosmarinic Acid C4H medium pass
PITA_000069201-RA Rosmarinic Acid C4H low borderline
PITA_000069443-RA Rosmarinic Acid C4H low borderline
PITA_000069478-RA Rosmarinic Acid C4H low borderline
PITA_000069677-RA Rosmarinic Acid C4H medium pass
PITA_000069687-RA Rosmarinic Acid C4H low borderline
PITA_000069888-RA Rosmarinic Acid C4H low borderline
PITA_000070154-RA Rosmarinic Acid C4H medium pass
PITA_000070258-RA Rosmarinic Acid C4H low borderline
PITA_000070329-RA Rosmarinic Acid C4H low borderline
PITA_000070368-RA Rosmarinic Acid C4H low borderline
PITA_000070508-RA Rosmarinic Acid C4H low borderline
PITA_000070787-RA Rosmarinic Acid C4H low borderline
PITA_000070945-RA Rosmarinic Acid C4H low borderline
PITA_000071437-RA Rosmarinic Acid C4H low borderline
PITA_000071576-RA Rosmarinic Acid C4H low borderline
PITA_000071639-RA Rosmarinic Acid C4H low borderline
PITA_000071640-RA Rosmarinic Acid C4H low borderline
PITA_000071810-RA Rosmarinic Acid C4H medium pass
PITA_000071940-RA Rosmarinic Acid C4H medium pass
PITA_000072016-RA Rosmarinic Acid C4H low borderline
PITA_000072128-RA Rosmarinic Acid C4H low borderline
PITA_000072227-RA Rosmarinic Acid C4H low borderline
PITA_000072272-RA Rosmarinic Acid C4H low borderline
PITA_000072351-RA Rosmarinic Acid C4H medium pass
PITA_000072357-RA Rosmarinic Acid C4H low borderline
PITA_000072463-RA Rosmarinic Acid C4H medium pass
PITA_000072551-RA Rosmarinic Acid C4H low borderline
PITA_000072637-RA Rosmarinic Acid C4H low borderline
PITA_000072646-RA Rosmarinic Acid C4H low borderline
PITA_000072652-RA Rosmarinic Acid C4H medium pass
PITA_000073006-RA Rosmarinic Acid C4H low borderline
PITA_000073022-RA Rosmarinic Acid C4H low borderline
PITA_000073188-RA Rosmarinic Acid C4H medium pass
PITA_000074201-RA Rosmarinic Acid C4H low borderline
PITA_000074204-RA Rosmarinic Acid C4H low borderline
PITA_000074526-RA Rosmarinic Acid C4H low borderline