PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000074612-RA Rosmarinic Acid C4H low borderline
PITA_000074613-RA Rosmarinic Acid C4H low borderline
PITA_000074614-RA Rosmarinic Acid C4H low borderline
PITA_000074708-RA Rosmarinic Acid C4H medium pass
PITA_000074800-RA Rosmarinic Acid C4H medium pass
PITA_000074888-RA Rosmarinic Acid C4H low borderline
PITA_000074926-RA Rosmarinic Acid C4H low borderline
PITA_000075114-RA Rosmarinic Acid C4H low borderline
PITA_000075141-RA Rosmarinic Acid C4H medium pass
PITA_000075297-RA Rosmarinic Acid C4H low borderline
PITA_000075298-RA Rosmarinic Acid C4H low borderline
PITA_000075416-RA Rosmarinic Acid C4H low borderline
PITA_000075461-RA Rosmarinic Acid C4H low borderline
PITA_000075472-RA Rosmarinic Acid C4H low borderline
PITA_000075473-RA Rosmarinic Acid C4H low borderline
PITA_000075585-RA Rosmarinic Acid C4H medium pass
PITA_000075792-RA Rosmarinic Acid C4H low borderline
PITA_000075839-RA Rosmarinic Acid C4H medium pass
PITA_000076004-RA Rosmarinic Acid C4H low borderline
PITA_000076041-RA Rosmarinic Acid C4H low borderline
PITA_000076042-RA Rosmarinic Acid C4H low borderline
PITA_000076096-RA Rosmarinic Acid C4H medium pass
PITA_000076273-RA Rosmarinic Acid C4H medium pass
PITA_000076418-RA Rosmarinic Acid C4H low borderline
PITA_000076444-RA Rosmarinic Acid C4H low borderline
PITA_000076452-RA Rosmarinic Acid C4H low borderline
PITA_000076511-RA Rosmarinic Acid C4H low borderline
PITA_000076682-RA Rosmarinic Acid C4H low borderline
PITA_000076706-RA Rosmarinic Acid C4H low borderline
PITA_000077229-RA Rosmarinic Acid C4H low borderline
PITA_000077279-RA Rosmarinic Acid C4H low borderline
PITA_000077296-RA Rosmarinic Acid C4H medium pass
PITA_000077318-RA Rosmarinic Acid C4H low borderline
PITA_000077638-RA Rosmarinic Acid C4H low borderline
PITA_000077664-RA Rosmarinic Acid C4H medium pass
PITA_000077814-RA Rosmarinic Acid C4H low borderline
PITA_000078315-RA Rosmarinic Acid C4H low borderline
PITA_000078503-RA Rosmarinic Acid C4H low borderline
PITA_000078537-RA Rosmarinic Acid C4H low borderline
PITA_000078538-RA Rosmarinic Acid C4H low borderline
PITA_000078589-RA Rosmarinic Acid C4H low borderline
PITA_000078716-RA Rosmarinic Acid C4H medium pass
PITA_000078752-RA Rosmarinic Acid C4H low borderline
PITA_000078969-RA Rosmarinic Acid C4H low borderline
PITA_000079206-RA Rosmarinic Acid C4H medium pass
PITA_000079350-RA Rosmarinic Acid C4H low borderline
PITA_000079570-RA Rosmarinic Acid C4H low borderline
PITA_000079579-RA Rosmarinic Acid C4H low borderline
PITA_000079715-RA Rosmarinic Acid C4H low borderline
PITA_000080006-RA Rosmarinic Acid C4H low borderline