PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000080007-RA Rosmarinic Acid C4H low borderline
PITA_000080128-RA Rosmarinic Acid C4H low borderline
PITA_000080176-RA Rosmarinic Acid C4H low borderline
PITA_000080255-RA Rosmarinic Acid C4H low borderline
PITA_000080656-RA Rosmarinic Acid C4H low borderline
PITA_000081015-RA Rosmarinic Acid C4H medium pass
PITA_000081074-RA Rosmarinic Acid C4H low borderline
PITA_000081211-RA Rosmarinic Acid C4H medium pass
PITA_000081243-RA Rosmarinic Acid C4H low borderline
PITA_000081366-RA Rosmarinic Acid C4H low borderline
PITA_000081550-RA Rosmarinic Acid C4H low borderline
PITA_000081720-RA Rosmarinic Acid C4H low borderline
PITA_000081721-RA Rosmarinic Acid C4H low borderline
PITA_000081785-RA Rosmarinic Acid C4H medium pass
PITA_000081896-RA Rosmarinic Acid C4H low borderline
PITA_000081970-RA Rosmarinic Acid C4H medium pass
PITA_000082129-RA Rosmarinic Acid C4H low borderline
PITA_000082543-RA Rosmarinic Acid C4H low borderline
PITA_000082851-RA Rosmarinic Acid C4H medium pass
PITA_000082899-RA Rosmarinic Acid C4H low borderline
PITA_000083049-RA Rosmarinic Acid C4H low borderline
PITA_000083269-RA Rosmarinic Acid C4H low borderline
PITA_000083594-RA Rosmarinic Acid C4H low borderline
PITA_000083697-RA Rosmarinic Acid C4H low borderline
PITA_000083816-RA Rosmarinic Acid C4H low borderline
PITA_000084045-RA Rosmarinic Acid C4H low borderline
PITA_000084135-RA Rosmarinic Acid C4H low borderline
PITA_000084550-RA Rosmarinic Acid C4H low borderline
PITA_000084551-RA Rosmarinic Acid C4H medium pass
PITA_000084577-RA Rosmarinic Acid C4H low borderline
PITA_000084733-RA Rosmarinic Acid C4H low borderline
PITA_000084833-RA Rosmarinic Acid C4H low borderline
PITA_000085230-RA Rosmarinic Acid C4H low borderline
PITA_000085267-RA Rosmarinic Acid C4H low borderline
PITA_000085354-RA Rosmarinic Acid C4H low borderline
PITA_000085566-RA Rosmarinic Acid C4H low borderline
PITA_000085579-RA Rosmarinic Acid C4H low borderline
PITA_000085580-RA Rosmarinic Acid C4H medium pass
PITA_000085745-RA Rosmarinic Acid C4H low borderline
PITA_000086040-RA Rosmarinic Acid C4H medium pass
PITA_000086235-RA Rosmarinic Acid C4H low borderline
PITA_000086303-RA Rosmarinic Acid C4H low borderline
PITA_000086320-RA Rosmarinic Acid C4H low borderline
PITA_000086373-RA Rosmarinic Acid C4H low borderline
PITA_000086380-RA Rosmarinic Acid C4H medium pass
PITA_000086381-RA Rosmarinic Acid C4H low borderline
PITA_000086429-RA Rosmarinic Acid C4H low borderline
PITA_000086445-RA Rosmarinic Acid C4H low borderline
PITA_000086849-RA Rosmarinic Acid C4H low borderline
PITA_000087463-RA Rosmarinic Acid C4H low borderline