PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
PITA_000087491-RA Rosmarinic Acid C4H low borderline
PITA_000087765-RA Rosmarinic Acid C4H low borderline
PITA_000087766-RA Rosmarinic Acid C4H medium pass
PITA_000087768-RA Rosmarinic Acid C4H low borderline
PITA_000087793-RA Rosmarinic Acid C4H low borderline
PITA_000087856-RA Rosmarinic Acid C4H low borderline
PITA_000087950-RA Rosmarinic Acid C4H low borderline
PITA_000088095-RA Rosmarinic Acid C4H medium pass
PITA_000088153-RA Rosmarinic Acid C4H low borderline
PITA_000088290-RA Rosmarinic Acid C4H low borderline
PITA_000088292-RA Rosmarinic Acid C4H low borderline
PITA_000088299-RA Rosmarinic Acid C4H low borderline
PITA_000088453-RA Rosmarinic Acid C4H low borderline
PITA_000088609-RA Rosmarinic Acid C4H low borderline
PITA_000089025-RA Rosmarinic Acid C4H low borderline
PITA_000089082-RA Rosmarinic Acid C4H low borderline
PITA_000089206-RA Rosmarinic Acid C4H low borderline
PITA_000089316-RA Rosmarinic Acid C4H low borderline
PITA_000089328-RA Rosmarinic Acid C4H low borderline
PITA_000089385-RA Rosmarinic Acid C4H low borderline
PITA_000089482-RA Rosmarinic Acid C4H low borderline
PITA_000089561-RA Rosmarinic Acid C4H medium pass
PITA_000089675-RA Rosmarinic Acid C4H low borderline
PITA_000089858-RA Rosmarinic Acid C4H low borderline
PITA_000090045-RA Rosmarinic Acid C4H low borderline
PITA_000090075-RA Rosmarinic Acid C4H medium pass
PITA_000090431-RA Rosmarinic Acid C4H medium pass
PITA_000090721-RA Rosmarinic Acid C4H low borderline
PITA_000090772-RA Rosmarinic Acid C4H low borderline
PITA_000090783-RA Rosmarinic Acid C4H low borderline
PITA_000090860-RA Rosmarinic Acid C4H low borderline
PITA_000091032-RA Rosmarinic Acid C4H low borderline
PITA_000091087-RA Rosmarinic Acid C4H low borderline
PITA_000091203-RA Rosmarinic Acid C4H medium pass
PITA_000091254-RA Rosmarinic Acid C4H low borderline
PITA_000091262-RA Rosmarinic Acid C4H low borderline
PITA_000091299-RA Rosmarinic Acid C4H low borderline
PITA_000091378-RA Rosmarinic Acid C4H low borderline
PITA_000091810-RA Rosmarinic Acid C4H medium pass
PITA_000091837-RA Rosmarinic Acid C4H low borderline
PITA_000091853-RA Rosmarinic Acid C4H low borderline
PITA_000091868-RA Rosmarinic Acid C4H low borderline
PITA_000091869-RA Rosmarinic Acid C4H low borderline
PITA_000091958-RA Rosmarinic Acid C4H low borderline
PITA_000092084-RA Rosmarinic Acid C4H low borderline
PITA_000092170-RA Rosmarinic Acid C4H low borderline
PITA_000092288-RA Rosmarinic Acid C4H low borderline
PITA_000092307-RA Rosmarinic Acid C4H low borderline
PITA_000092686-RA Rosmarinic Acid C4H low borderline
PITA_000092718-RA Rosmarinic Acid C4H low borderline