PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000092869-RA Rosmarinic Acid C4H low borderline
PITA_000092870-RA Rosmarinic Acid C4H low borderline
PITA_000092882-RA Rosmarinic Acid C4H low borderline
PITA_000092926-RA Rosmarinic Acid C4H low borderline
PITA_000092983-RA Rosmarinic Acid C4H low borderline
PITA_000093010-RA Rosmarinic Acid C4H low borderline
PITA_000093021-RA Rosmarinic Acid C4H low borderline
PITA_000093074-RA Rosmarinic Acid C4H low borderline
PITA_000093134-RA Rosmarinic Acid C4H medium pass
PITA_000093135-RA Rosmarinic Acid C4H low borderline
PITA_000093264-RA Rosmarinic Acid C4H low borderline
PITA_000093430-RA Rosmarinic Acid C4H low borderline
PITA_000093489-RA Rosmarinic Acid C4H medium pass
PITA_000093519-RA Rosmarinic Acid C4H low borderline
PITA_000093616-RA Rosmarinic Acid C4H medium pass
PITA_000093733-RA Rosmarinic Acid C4H medium pass
PITA_000093955-RA Rosmarinic Acid C4H low borderline
PITA_000094047-RA Rosmarinic Acid C4H low borderline
PITA_000094099-RA Rosmarinic Acid C4H low borderline
PITA_000094185-RA Rosmarinic Acid C4H low borderline
PITA_000094202-RA Rosmarinic Acid C4H low borderline
PITA_000094230-RA Rosmarinic Acid C4H low borderline
PITA_000094231-RA Rosmarinic Acid C4H low borderline
PITA_000094261-RA Rosmarinic Acid C4H low borderline
PITA_000094495-RA Rosmarinic Acid C4H low borderline
PITA_000094531-RA Rosmarinic Acid C4H low borderline
PITA_000094695-RA Rosmarinic Acid C4H low borderline
PITA_000094696-RA Rosmarinic Acid C4H low borderline
PITA_000094754-RA Rosmarinic Acid C4H low borderline
PITA_000094808-RA Rosmarinic Acid C4H low borderline
PITA_000094858-RA Rosmarinic Acid C4H low borderline
PITA_000094894-RA Rosmarinic Acid C4H low borderline
PITA_000095071-RA Rosmarinic Acid C4H low borderline
PITA_000095072-RA Rosmarinic Acid C4H low borderline
PITA_000095118-RA Rosmarinic Acid C4H low borderline
PITA_000095135-RA Rosmarinic Acid C4H low borderline
PITA_000095405-RA Rosmarinic Acid C4H low borderline
PITA_000095437-RA Rosmarinic Acid C4H low borderline
PITA_000095452-RA Rosmarinic Acid C4H low borderline
PITA_000095552-RA Rosmarinic Acid C4H low borderline
PITA_000095598-RA Rosmarinic Acid C4H low borderline
PITA_000095733-RA Rosmarinic Acid C4H low borderline
PITA_000095736-RA Rosmarinic Acid C4H low borderline
PITA_000095847-RA Rosmarinic Acid C4H low borderline
PITA_000095848-RA Rosmarinic Acid C4H low borderline
PITA_000095920-RA Rosmarinic Acid C4H medium pass
PITA_000096080-RA Rosmarinic Acid C4H low borderline
PITA_000096156-RA Rosmarinic Acid C4H low borderline
PITA_000096549-RA Rosmarinic Acid C4H low borderline
PITA_000096595-RA Rosmarinic Acid C4H medium pass