PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
PITA_000075386-RA Terpenoid BAHD medium borderline BAHD__00044__sp_Q56WD9_THIK2_ARATH
PITA_000075759-RA Terpenoid BAHD medium borderline BAHD__00044__sp_Q56WD9_THIK2_ARATH
PITA_000076012-RA Terpenoid BAHD medium pass BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH
PITA_000076513-RA Terpenoid BAHD medium pass BAHD__00074__sp_Q9FFQ7_FACT_ARATH
PITA_000076515-RA Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000076517-RA Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000076781-RA Terpenoid BAHD medium pass BAHD__00062__sp_Q93V61_LCAT3_ARATH
PITA_000076804-RA Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
PITA_000076926-RA Terpenoid BAHD low borderline BAHD__00081__sp_Q9LJB4_5MAT_ARATH
PITA_000076933-RA Terpenoid BAHD low borderline BAHD__00069__sp_Q9C5W0_DGAT3_ARATH
PITA_000077088-RA Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
PITA_000077124-RA Terpenoid BAHD low borderline BAHD__00047__sp_Q5KS41_WSD11_ARATH
PITA_000077270-RA Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
PITA_000077776-RA Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
PITA_000077985-RA Terpenoid BAHD medium pass BAHD__00087__sp_Q9M3B1_WSD6_ARATH
PITA_000078904-RA Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000079038-RA Terpenoid BAHD medium pass BAHD__00074__sp_Q9FFQ7_FACT_ARATH
PITA_000079059-RA Terpenoid BAHD medium pass BAHD__00001__sp_A0A068BGA5_AT1_ACTDE
PITA_000079071-RA Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
PITA_000079812-RA Terpenoid BAHD low borderline BAHD__00074__sp_Q9FFQ7_FACT_ARATH
PITA_000079979-RA Terpenoid BAHD low borderline BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN
PITA_000080057-RA Terpenoid BAHD low borderline BAHD__00069__sp_Q9C5W0_DGAT3_ARATH
PITA_000080094-RA Terpenoid BAHD low borderline BAHD__00044__sp_Q56WD9_THIK2_ARATH
PITA_000080551-RA Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
PITA_000080592-RA Terpenoid BAHD medium pass BAHD__00087__sp_Q9M3B1_WSD6_ARATH
PITA_000080615-RA Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
PITA_000080973-RA Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
PITA_000081116-RA Terpenoid BAHD medium pass BAHD__00097__sp_Q9ZV87_NAPES_ARATH
PITA_000081154-RA Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
PITA_000081310-RA Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
PITA_000081323-RA Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
PITA_000081575-RA Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
PITA_000081752-RA Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
PITA_000082066-RA Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
PITA_000082240-RA Terpenoid BAHD medium pass BAHD__00006__sp_A0A2R6Q326_AT16_ACTCC
PITA_000082446-RA Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000082906-RA Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
PITA_000082960-RA Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
PITA_000082970-RA Terpenoid BAHD medium borderline BAHD__00044__sp_Q56WD9_THIK2_ARATH
PITA_000083034-RA Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000083057-RA Terpenoid BAHD medium pass BAHD__00043__sp_Q52T38_ZDH22_ARATH
PITA_000083577-RA Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000083647-RA Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
PITA_000083665-RA Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000083698-RA Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000083864-RA Terpenoid BAHD medium pass BAHD__00074__sp_Q9FFQ7_FACT_ARATH
PITA_000083918-RA Terpenoid BAHD low borderline BAHD__00074__sp_Q9FFQ7_FACT_ARATH
PITA_000083951-RA Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
PITA_000084122-RA Terpenoid BAHD low borderline BAHD__00073__sp_Q9FF86_DCR_ARATH
PITA_000084218-RA Terpenoid BAHD medium pass BAHD__00061__sp_Q8VYS8_ZDH24_ARATH