Pinus taeda (pinus_taeda)

This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Download candidate protein FASTA for this species

Pathway Coverage

6 Pathways

Terpenoid pathway 27.92% Phenylpropanoid pathway 23.93% Alkaloid pathway 19.88% Flavonoid pathway 15.18% Rosmarinic acid pathway 7.75% Steroid pathway 5.34%

Family Distribution

12692 Family-Level Calls

C4H 5.65% C3'H/CYP98A 5.17% UGT 4.84% 4CL 4.56% CYP76 4.22% BAHD 4.21% POD 4.18% 7DLGT 3.84%

Other Families 63.32%

More Families (98)

UFGT 426 3.36% IFS 424 3.34% TPS 369 2.91% F3H 301 2.37% DWF4/CYP90B1 292 2.3% CAD 273 2.15% GES 258 2.03% F3'H/CYP75B 253 1.99% CAS 239 1.88% BR6OX2/CYP85A2 234 1.84% G8O/G8H 232 1.83% LAC 227 1.79% T3O 208 1.64% H6H 200 1.58% IFR 189 1.49% T16H 183 1.44% CODM/T6ODM 181 1.43% IO 156 1.23% NMT 151 1.19% F3'5'H/CYP75A 138 1.09% TRI/TRII 135 1.06% SGD 134 1.06% COMT 128 1.01% HCT 118 0.93% PAL 117 0.92% STR 98 0.77% SMT1/SMT2/SMT3 98 0.77% FNS 96 0.76% F5H/CYP84A 94 0.74% PYKS 92 0.72% 8HGO 89 0.7% 7DLH 89 0.7% RAS 85 0.67% GS 84 0.66% 16OMT 80 0.63% PMT 76 0.6% SLS 75 0.59% ANR 74 0.58% HMGR 74 0.58% ANS/LDOX 73 0.58% DFR 69 0.54% CYP90D1 69 0.54% CHS 67 0.53% CCR 64 0.5% LAMT 60 0.47% NCS 59 0.46% CSE 54 0.43% TAT 50 0.39% CPD/CYP90A1 47 0.37% GGPPS 43 0.34% BR6OX1/CYP85A1 41 0.32% CYP80B1 39 0.31% ISY 38 0.3% BBE 34 0.27% CYP71 31 0.24% XMT_MXMT_DXMT 28 0.22% ADC 26 0.2% ODC 24 0.19% CHI 24 0.19% FPPS 24 0.19% CYP719 23 0.18% COR 22 0.17% 6OMT_4OMT_SOMT 19 0.15% CCoAOMT 18 0.14% ROT3/CYP90C1 18 0.14% CNMT 17 0.13% MPO 15 0.12% FLS 15 0.12% DWF1 13 0.1% DET2 12 0.09% AACT 12 0.09% CYP51G1 10 0.08% CPR 9 0.07% HDS/IspG 9 0.07% IDI 9 0.07% MVK 8 0.06% HPPR 7 0.06% DWF5 7 0.06% CYP80F1 6 0.05% CMK/IspE 6 0.05% DXS 6 0.05% TDC 4 0.03% SQS/FDFT1 4 0.03% SQE 4 0.03% HYD1 3 0.02% CPI1 3 0.02% HDR/IspH 3 0.02% HMGS 3 0.02% MVD 3 0.02% FK 2 0.02% SMO1/SMO2 2 0.02% DWF7 2 0.02% DXR 2 0.02% PMK 2 0.02% MDS/IspF 2 0.02% TYDC_DDC 1 0.01% MCT/IspD 1 0.01% GPPS 1 0.01%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Pathway-Level Records	Detected Families	Top family	Results
Terpenoid pathway	1469	18	UGT (484)	View species results
Phenylpropanoid pathway	1259	13	POD (460)	View species results
Alkaloid pathway	1046	30	7DLGT (246)	View species results
Flavonoid pathway	799	16	UFGT (341)	View species results
Rosmarinic acid pathway	408	7	4CL (161)	View species results
Steroid pathway	281	16	CAS (195)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Detected families	Assignment calls	Included families
P450/oxygenase	24	4571	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	737	BAHD, HCT, RAS

Identification Result List

Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.

Current pathway filter: Terpenoid pathway

Protein/Isoform Record	Pathway	Family	Confidence	Status	Best Target
PITA_000084219-RA	Terpenoid	BAHD	medium	pass	BAHD__00076__sp_Q9FLM3_ZDH23_ARATH
PITA_000084492-RA	Terpenoid	BAHD	low	borderline	BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN
PITA_000084527-RA	Terpenoid	BAHD	medium	pass	BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000084581-RA	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
PITA_000085124-RA	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
PITA_000085135-RA	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
PITA_000085159-RA	Terpenoid	BAHD	medium	borderline	BAHD__00044__sp_Q56WD9_THIK2_ARATH
PITA_000085405-RA	Terpenoid	BAHD	low	borderline	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
PITA_000085453-RA	Terpenoid	BAHD	low	borderline	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
PITA_000085542-RA	Terpenoid	BAHD	medium	pass	BAHD__00012__sp_A1XWY7_CFAT_PETHY
PITA_000085543-RA	Terpenoid	BAHD	low	borderline	BAHD__00012__sp_A1XWY7_CFAT_PETHY
PITA_000085583-RA	Terpenoid	BAHD	medium	pass	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
PITA_000085660-RA	Terpenoid	BAHD	medium	pass	BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN
PITA_000085925-RA	Terpenoid	BAHD	medium	pass	BAHD__00025__sp_O64810_SCP10_ARATH
PITA_000086242-RA	Terpenoid	BAHD	low	borderline	BAHD__00073__sp_Q9FF86_DCR_ARATH
PITA_000086243-RA	Terpenoid	BAHD	medium	pass	BAHD__00047__sp_Q5KS41_WSD11_ARATH
PITA_000086257-RA	Terpenoid	BAHD	low	borderline	BAHD__00093__sp_Q9SV07_ASAT1_ARATH
PITA_000086442-RA	Terpenoid	BAHD	medium	pass	BAHD__00012__sp_A1XWY7_CFAT_PETHY
PITA_000086671-RA	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
PITA_000086794-RA	Terpenoid	BAHD	medium	pass	BAHD__00001__sp_A0A068BGA5_AT1_ACTDE
PITA_000087134-RA	Terpenoid	BAHD	low	borderline	BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN
PITA_000087211-RA	Terpenoid	BAHD	low	borderline	BAHD__00073__sp_Q9FF86_DCR_ARATH
PITA_000087286-RA	Terpenoid	BAHD	medium	pass	BAHD__00017__sp_F4IDU4_MBOA1_ARATH
PITA_000087561-RA	Terpenoid	BAHD	low	borderline	BAHD__00073__sp_Q9FF86_DCR_ARATH
PITA_000087723-RA	Terpenoid	BAHD	medium	pass	BAHD__00067__sp_Q9ASU1_DGAT2_ARATH
PITA_000087801-RA	Terpenoid	BAHD	medium	pass	BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000087930-RA	Terpenoid	BAHD	medium	pass	BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
PITA_000088021-RA	Terpenoid	BAHD	medium	pass	BAHD__00076__sp_Q9FLM3_ZDH23_ARATH
PITA_000088152-RA	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
PITA_000088158-RA	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
PITA_000088167-RA	Terpenoid	BAHD	medium	pass	BAHD__00022__sp_K7PEY4_RAM2_MEDTR
PITA_000088319-RA	Terpenoid	BAHD	low	borderline	BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN
PITA_000088441-RA	Terpenoid	BAHD	medium	pass	BAHD__00002__sp_A0A068BIF1_AT9_ACTER
PITA_000088690-RA	Terpenoid	BAHD	low	borderline	BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN
PITA_000088828-RA	Terpenoid	BAHD	medium	pass	BAHD__00055__sp_Q8H780_SCP13_ARATH
PITA_000089137-RA	Terpenoid	BAHD	medium	borderline	BAHD__00045__sp_Q570C8_THIK5_ARATH
PITA_000089313-RA	Terpenoid	BAHD	medium	pass	BAHD__00012__sp_A1XWY7_CFAT_PETHY
PITA_000089314-RA	Terpenoid	BAHD	medium	pass	BAHD__00073__sp_Q9FF86_DCR_ARATH
PITA_000089332-RA	Terpenoid	BAHD	medium	pass	BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000089667-RA	Terpenoid	BAHD	low	borderline	BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN
PITA_000090281-RA	Terpenoid	BAHD	low	borderline	BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN
PITA_000090770-RA	Terpenoid	BAHD	medium	pass	BAHD__00025__sp_O64810_SCP10_ARATH
PITA_000091342-RA	Terpenoid	BAHD	medium	pass	BAHD__00012__sp_A1XWY7_CFAT_PETHY
PITA_000091564-RA	Terpenoid	BAHD	medium	pass	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
PITA_000091797-RA	Terpenoid	BAHD	medium	pass	BAHD__00001__sp_A0A068BGA5_AT1_ACTDE
PITA_000092009-RA	Terpenoid	BAHD	medium	pass	BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH
PITA_000092363-RA	Terpenoid	BAHD	medium	pass	BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000092769-RA	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
PITA_000093053-RA	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
PITA_000093365-RA	Terpenoid	BAHD	medium	pass	BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA