PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000093547-RA Terpenoid BAHD medium pass
PITA_000093810-RA Terpenoid BAHD low borderline
PITA_000093883-RA Terpenoid BAHD medium pass
PITA_000093930-RA Terpenoid BAHD medium pass
PITA_000094193-RA Terpenoid BAHD medium pass
PITA_000094302-RA Terpenoid BAHD medium pass
PITA_000094359-RA Terpenoid BAHD medium pass
PITA_000094622-RA Terpenoid BAHD low borderline
PITA_000094691-RA Terpenoid BAHD medium pass
PITA_000094980-RA Terpenoid BAHD medium pass
PITA_000095126-RA Terpenoid BAHD low borderline
PITA_000095285-RA Terpenoid BAHD medium pass
PITA_000095334-RA Terpenoid BAHD low borderline
PITA_000095436-RA Terpenoid BAHD low borderline
PITA_000095528-RA Terpenoid BAHD medium pass
PITA_000095610-RA Terpenoid BAHD medium pass
PITA_000095793-RA Terpenoid BAHD low borderline
PITA_000095842-RA Terpenoid BAHD low borderline
PITA_000095991-RA Terpenoid BAHD medium pass
PITA_000095997-RA Terpenoid BAHD medium pass
PITA_000096233-RA Terpenoid BAHD low borderline
PITA_000096298-RA Terpenoid BAHD medium pass
PITA_000096575-RA Terpenoid BAHD low borderline
PITA_000096576-RA Terpenoid BAHD low borderline
PITA_000096715-RA Terpenoid BAHD medium pass
PITAhm_000061-RA Terpenoid BAHD medium pass
PITAhm_000070-RA Terpenoid BAHD low borderline
PITAhm_000962-RA Terpenoid BAHD medium pass
PITAhm_001138-RA Terpenoid BAHD low borderline
PITAhm_001270-RA Terpenoid BAHD low borderline
PITAhm_001303-RA Terpenoid BAHD medium pass
PITAhm_001333-RA Terpenoid BAHD low borderline
PITAhm_001833-RA Terpenoid BAHD low borderline
PITAhm_001926-RA Terpenoid BAHD low borderline
PITAhm_001928-RA Terpenoid BAHD medium pass
PITAhm_002051-RA Terpenoid BAHD low borderline
PITAhm_002089-RA Terpenoid BAHD medium pass
PITAhm_002451-RA Terpenoid BAHD low borderline
PITAhm_002518-RA Terpenoid BAHD medium pass
PITAhm_002576-RA Terpenoid BAHD low borderline
PITAhm_002581-RA Terpenoid BAHD medium pass
PITAhm_002625-RA Terpenoid BAHD medium pass
PITAhm_002687-RA Terpenoid BAHD medium pass
PITAhm_002943-RA Terpenoid BAHD low borderline
PITAhm_003017-RA Terpenoid BAHD medium pass
PITAhm_003270-RA Terpenoid BAHD medium pass
PITA_000002419-RA Terpenoid CMK/IspE low borderline
PITA_000010570-RA Terpenoid CMK/IspE low borderline
PITA_000037507-RA Terpenoid CMK/IspE medium pass
PITA_000037508-RA Terpenoid CMK/IspE high pass