PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Bca_GomC07g63860.mRNA1 Flavonoid IFS medium borderline
Bca_GomC07g63870.mRNA1 Flavonoid IFS medium borderline
Bca_GomC07g63880.mRNA1 Flavonoid IFS medium borderline
Bca_GomC07g64440.mRNA1 Flavonoid IFS low borderline
Bca_GomC07g64510.mRNA1 Flavonoid IFS medium borderline
Bca_GomC07g69150.mRNA1 Flavonoid IFS low borderline
Bca_GomC07g71700.mRNA1 Flavonoid IFS medium borderline
Bca_GomC08g02440.mRNA1 Flavonoid IFS medium borderline
Bca_GomC08g02460.mRNA1 Flavonoid IFS medium borderline
Bca_GomC08g13770.mRNA1 Flavonoid IFS low borderline
Bca_GomC08g14260.mRNA1 Flavonoid IFS low borderline
Bca_GomC08g24720.mRNA1 Flavonoid IFS medium borderline
Bca_GomC08g24740.mRNA1 Flavonoid IFS medium borderline
Bca_GomC08g26720.mRNA1 Flavonoid IFS low borderline
Bca_GomC08g29030.mRNA1 Flavonoid IFS low borderline
Bca_GomC08g29100.mRNA1 Flavonoid IFS low borderline
Bca_GomC08g29270.mRNA1 Flavonoid IFS low borderline
Bca_GomC08g35180.mRNA1 Flavonoid IFS medium borderline
Bca_GomC08g48760.mRNA1 Flavonoid IFS medium borderline
Bca_GomC08g49270.mRNA1 Flavonoid IFS medium borderline
Bca_GomC08g49280.mRNA1 Flavonoid IFS low borderline
Bca_GomC08g49520.mRNA1 Flavonoid IFS low borderline
Bca_GomC08g49540.mRNA1 Flavonoid IFS medium borderline
Bca_GomC08g54320.mRNA1 Flavonoid IFS low borderline
Bca_GomC08g54630.mRNA1 Flavonoid IFS low borderline
Bca_GomC08g54640.mRNA1 Flavonoid IFS low borderline
Bca_GomC08g58300.mRNA1 Flavonoid IFS medium borderline
Bca_GomC08g58340.mRNA1 Flavonoid IFS medium borderline
Bca_GomC08g58350.mRNA1 Flavonoid IFS medium borderline
Bca_GomC08g58360.mRNA2 Flavonoid IFS medium borderline
Bca_GomC09g02530.mRNA1 Flavonoid IFS low borderline
Bca_GomC09g06070.mRNA1 Flavonoid IFS medium borderline
Bca_GomC09g07110.mRNA1 Flavonoid IFS low borderline
Bca_GomC09g10040.mRNA1 Flavonoid IFS medium borderline
Bca_GomC09g19590.mRNA1 Flavonoid IFS medium borderline
Bca_GomC09g20790.mRNA1 Flavonoid IFS low borderline
Bca_GomC09g23550.mRNA1 Flavonoid IFS low borderline
Bca_GomC09g24930.mRNA1 Flavonoid IFS low borderline
Bca_GomC09g26990.mRNA1 Flavonoid IFS medium borderline
Bca_GomC09g35950.mRNA1 Flavonoid IFS medium borderline
Bca_GomC09g60110.mRNA1 Flavonoid IFS low borderline
Bca_GomC09g63050.mRNA1 Flavonoid IFS medium borderline
Bca_GomC09g63100.mRNA1 Flavonoid IFS medium borderline
Bca_GomB01g08030.mRNA1 Flavonoid PAL high pass
Bca_GomB01g08060.mRNA1 Flavonoid PAL high pass
Bca_GomB01g54160.mRNA1 Flavonoid PAL high pass
Bca_GomB01g54330.mRNA1 Flavonoid PAL high pass
Bca_GomB01g54340.mRNA1 Flavonoid PAL medium pass
Bca_GomB05g17800.mRNA1 Flavonoid PAL high pass
Bca_GomB05g45730.mRNA1 Flavonoid PAL high pass