PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

/

Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status Best Target
Bca_GomB08g34250.mRNA1 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Bca_GomB08g62850.mRNA1 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Bca_GomB08g63080.mRNA1 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Bca_GomB08g77440.mRNA1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
Bca_GomC01g23700.mRNA1 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Bca_GomC02g02340.mRNA1 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Bca_GomC02g04880.mRNA1 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
Bca_GomC02g61420.mRNA1 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
Bca_GomC03g20790.mRNA1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
Bca_GomC03g21130.mRNA1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
Bca_GomC03g21140.mRNA1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
Bca_GomC03g29610.mRNA1 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Bca_GomC03g29900.mRNA1 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Bca_GomC03g31190.mRNA1 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Bca_GomC03g31530.mRNA1 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Bca_GomC03g46320.mRNA1 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Bca_GomC03g62730.mRNA1 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
Bca_GomC03g63190.mRNA1 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
Bca_GomC03g77400.mRNA1 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Bca_GomC04g08320.mRNA1 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Bca_GomC04g08670.mRNA1 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
Bca_GomC04g60530.mRNA1 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Bca_GomC04g60760.mRNA1 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Bca_GomC05g04500.mRNA1 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Bca_GomC05g29970.mRNA1 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Bca_GomC06g01590.mRNA1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
Bca_GomC06g24310.mRNA1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
Bca_GomC07g05580.mRNA1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
Bca_GomC07g17250.mRNA1 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Bca_GomC08g31810.mRNA1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
Bca_GomC08g49580.mRNA1 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Bca_GomC09g57850.mRNA1 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Bca_GomB01g02810.mRNA1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Bca_GomB01g03100.mRNA1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Bca_GomB01g07030.mRNA1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Bca_GomB01g15170.mRNA1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Bca_GomB01g52240.mRNA1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Bca_GomB01g52680.mRNA1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Bca_GomB01g55120.mRNA1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Bca_GomB01g55130.mRNA1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Bca_GomB01g55290.mRNA1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Bca_GomB01g55310.mRNA1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Bca_GomB01g65490.mRNA1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Bca_GomB01g66050.mRNA1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Bca_GomB02g34100.mRNA1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Bca_GomB02g37330.mRNA1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Bca_GomB02g37340.mRNA1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Bca_GomB02g37350.mRNA1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Bca_GomB02g47570.mRNA1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Bca_GomB02g47580.mRNA1 Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH