PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
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Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Bca_GomC09g27690.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g28030.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g28490.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g29940.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g30280.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g30520.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g33440.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g42740.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g43050.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g43190.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g44210.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g44230.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g45710.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g49470.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g50810.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g51320.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g52720.mRNA1 Phenylpropanoid POD low borderline
Bca_GomC09g53210.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g54730.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g58630.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g58640.mRNA1 Phenylpropanoid POD medium pass
Bca_GomC09g59020.mRNA1 Phenylpropanoid POD low borderline
Bca_GomC09g60310.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB01g01140.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB01g18250.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB01g28180.mRNA1 Rosmarinic Acid 4CL low borderline
Bca_GomB01g31520.mRNA1 Rosmarinic Acid 4CL low borderline
Bca_GomB01g43790.mRNA1 Rosmarinic Acid 4CL low borderline
Bca_GomB01g43970.mRNA1 Rosmarinic Acid 4CL low borderline
Bca_GomB01g44810.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB01g57910.mRNA2 Rosmarinic Acid 4CL low borderline
Bca_GomB01g57950.mRNA1 Rosmarinic Acid 4CL low borderline
Bca_GomB01g57970.mRNA1 Rosmarinic Acid 4CL low borderline
Bca_GomB01g57990.mRNA1 Rosmarinic Acid 4CL low borderline
Bca_GomB01g58040.mRNA1 Rosmarinic Acid 4CL low borderline
Bca_GomB01g64940.mRNA1 Rosmarinic Acid 4CL low borderline
Bca_GomB02g02300.mRNA1 Rosmarinic Acid 4CL low borderline
Bca_GomB02g104220.mRNA1 Rosmarinic Acid 4CL low borderline
Bca_GomB02g55640.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB02g57650.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB02g84400.mRNA1 Rosmarinic Acid 4CL low borderline
Bca_GomB02g85180.mRNA1 Rosmarinic Acid 4CL low borderline
Bca_GomB03g14000.mRNA1 Rosmarinic Acid 4CL low borderline
Bca_GomB03g14010.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB03g14020.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB03g33760.mRNA1 Rosmarinic Acid 4CL low borderline
Bca_GomB03g34090.mRNA1 Rosmarinic Acid 4CL low borderline
Bca_GomB03g38640.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB03g39240.mRNA1 Rosmarinic Acid 4CL medium pass
Bca_GomB03g39250.mRNA1 Rosmarinic Acid 4CL medium pass