PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

/

Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Bca_GomB08g78580.mRNA1 Alkaloid NCS medium borderline
Bca_GomC01g19370.mRNA1 Alkaloid NCS medium borderline
Bca_GomC01g34000.mRNA1 Alkaloid NCS medium borderline
Bca_GomC02g17560.mRNA1 Alkaloid NCS medium borderline
Bca_GomC02g17590.mRNA1 Alkaloid NCS medium borderline
Bca_GomC03g53740.mRNA1 Alkaloid NCS medium borderline
Bca_GomC03g69390.mRNA1 Alkaloid NCS medium borderline
Bca_GomC03g91300.mRNA1 Alkaloid NCS medium borderline
Bca_GomC04g04210.mRNA1 Alkaloid NCS medium borderline
Bca_GomC04g14990.mRNA1 Alkaloid NCS medium borderline
Bca_GomC05g03440.mRNA1 Alkaloid NCS medium borderline
Bca_GomC05g03490.mRNA1 Alkaloid NCS medium borderline
Bca_GomC05g08000.mRNA1 Alkaloid NCS medium borderline
Bca_GomC05g19460.mRNA1 Alkaloid NCS medium pass
Bca_GomC05g36280.mRNA1 Alkaloid NCS low borderline
Bca_GomC05g38530.mRNA1 Alkaloid NCS medium borderline
Bca_GomC06g00960.mRNA1 Alkaloid NCS medium borderline
Bca_GomC08g52230.mRNA1 Alkaloid NCS medium borderline
Bca_GomC08g52570.mRNA1 Alkaloid NCS medium borderline
Bca_GomB01g08210.mRNA1 Alkaloid NMT low borderline
Bca_GomB01g08240.mRNA1 Alkaloid NMT low borderline
Bca_GomB01g12080.mRNA1 Alkaloid NMT medium pass
Bca_GomB01g14160.mRNA1 Alkaloid NMT medium pass
Bca_GomB01g21290.mRNA1 Alkaloid NMT medium pass
Bca_GomB01g21600.mRNA1 Alkaloid NMT medium pass
Bca_GomB01g21890.mRNA1 Alkaloid NMT medium pass
Bca_GomB01g22270.mRNA1 Alkaloid NMT medium pass
Bca_GomB01g23020.mRNA1 Alkaloid NMT medium pass
Bca_GomB01g37100.mRNA1 Alkaloid NMT medium borderline
Bca_GomB01g37200.mRNA1 Alkaloid NMT medium borderline
Bca_GomB01g37240.mRNA1 Alkaloid NMT medium borderline
Bca_GomB01g39700.mRNA1 Alkaloid NMT medium pass
Bca_GomB01g41610.mRNA1 Alkaloid NMT low borderline
Bca_GomB01g41870.mRNA1 Alkaloid NMT medium borderline
Bca_GomB01g45850.mRNA1 Alkaloid NMT medium borderline
Bca_GomB01g47670.mRNA1 Alkaloid NMT low borderline
Bca_GomB01g48010.mRNA1 Alkaloid NMT low borderline
Bca_GomB01g50940.mRNA1 Alkaloid NMT medium pass
Bca_GomB01g51590.mRNA1 Alkaloid NMT medium borderline
Bca_GomB01g52530.mRNA1 Alkaloid NMT medium borderline
Bca_GomB01g56840.mRNA1 Alkaloid NMT medium pass
Bca_GomB01g59550.mRNA1 Alkaloid NMT medium pass
Bca_GomB01g63470.mRNA1 Alkaloid NMT medium pass
Bca_GomB01g68000.mRNA1 Alkaloid NMT medium borderline
Bca_GomB01g71270.mRNA1 Alkaloid NMT medium pass
Bca_GomB01g71490.mRNA2 Alkaloid NMT medium pass
Bca_GomB02g05110.mRNA1 Alkaloid NMT medium pass
Bca_GomB02g09080.mRNA1 Alkaloid NMT medium pass
Bca_GomB02g19670.mRNA1 Alkaloid NMT medium pass
Bca_GomB02g26930.mRNA2 Alkaloid NMT medium borderline