PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Bca_GomB06g75460.mRNA1 Alkaloid SGD medium pass
Bca_GomB06g76770.mRNA1 Alkaloid SGD medium pass
Bca_GomB06g76780.mRNA1 Alkaloid SGD medium pass
Bca_GomB06g76790.mRNA1 Alkaloid SGD medium pass
Bca_GomB07g01240.mRNA1 Alkaloid SGD medium pass
Bca_GomB07g07800.mRNA1 Alkaloid SGD medium pass
Bca_GomB07g11920.mRNA1 Alkaloid SGD medium pass
Bca_GomB07g11940.mRNA1 Alkaloid SGD medium pass
Bca_GomB07g14770.mRNA1 Alkaloid SGD medium pass
Bca_GomB07g14810.mRNA1 Alkaloid SGD medium pass
Bca_GomB07g21790.mRNA1 Alkaloid SGD medium pass
Bca_GomB07g22350.mRNA1 Alkaloid SGD medium pass
Bca_GomB07g22360.mRNA1 Alkaloid SGD medium pass
Bca_GomB07g24910.mRNA2 Alkaloid SGD medium pass
Bca_GomB07g25400.mRNA1 Alkaloid SGD low borderline
Bca_GomB07g25900.mRNA1 Alkaloid SGD medium pass
Bca_GomB07g27440.mRNA1 Alkaloid SGD medium pass
Bca_GomB07g27460.mRNA1 Alkaloid SGD medium pass
Bca_GomB07g61000.mRNA1 Alkaloid SGD medium pass
Bca_GomB07g61060.mRNA1 Alkaloid SGD medium pass
Bca_GomB07g64410.mRNA1 Alkaloid SGD medium pass
Bca_GomB07g76520.mRNA1 Alkaloid SGD medium pass
Bca_GomB07g76530.mRNA1 Alkaloid SGD medium pass
Bca_GomB07g76540.mRNA1 Alkaloid SGD medium pass
Bca_GomB07g76550.mRNA1 Alkaloid SGD low borderline
Bca_GomB08g01970.mRNA1 Alkaloid SGD medium pass
Bca_GomB08g19150.mRNA1 Alkaloid SGD medium pass
Bca_GomB08g19160.mRNA1 Alkaloid SGD medium pass
Bca_GomB08g37690.mRNA1 Alkaloid SGD medium pass
Bca_GomB08g40590.mRNA1 Alkaloid SGD medium pass
Bca_GomB08g93860.mRNA1 Alkaloid SGD medium pass
Bca_GomC01g05860.mRNA1 Alkaloid SGD medium pass
Bca_GomC01g38950.mRNA1 Alkaloid SGD medium pass
Bca_GomC01g38980.mRNA1 Alkaloid SGD medium pass
Bca_GomC01g41870.mRNA1 Alkaloid SGD medium pass
Bca_GomC01g42040.mRNA1 Alkaloid SGD medium pass
Bca_GomC01g42640.mRNA1 Alkaloid SGD medium pass
Bca_GomC01g45410.mRNA1 Alkaloid SGD medium pass
Bca_GomC01g45440.mRNA1 Alkaloid SGD medium pass
Bca_GomC01g53830.mRNA1 Alkaloid SGD medium pass
Bca_GomC01g55180.mRNA1 Alkaloid SGD low borderline
Bca_GomC01g55970.mRNA1 Alkaloid SGD medium pass
Bca_GomC01g55980.mRNA1 Alkaloid SGD medium pass
Bca_GomC01g58660.mRNA1 Alkaloid SGD medium pass
Bca_GomC02g30090.mRNA1 Alkaloid SGD low borderline
Bca_GomC02g55540.mRNA1 Alkaloid SGD medium pass
Bca_GomC02g55550.mRNA1 Alkaloid SGD medium pass
Bca_GomC02g55560.mRNA1 Alkaloid SGD medium pass
Bca_GomC02g55970.mRNA1 Alkaloid SGD low borderline
Bca_GomC02g55980.mRNA1 Alkaloid SGD medium pass