PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
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Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Bca_GomC07g15980.mRNA1 Alkaloid STR medium pass
Bca_GomC07g35120.mRNA1 Alkaloid STR low borderline
Bca_GomC07g39220.mRNA1 Alkaloid STR low borderline
Bca_GomC07g57010.mRNA1 Alkaloid STR low borderline
Bca_GomC07g57950.mRNA1 Alkaloid STR low borderline
Bca_GomC07g68810.mRNA2 Alkaloid STR low borderline
Bca_GomC08g13780.mRNA1 Alkaloid STR medium pass
Bca_GomC08g25790.mRNA1 Alkaloid STR low borderline
Bca_GomC08g26010.mRNA1 Alkaloid STR low borderline
Bca_GomC08g27600.mRNA1 Alkaloid STR low borderline
Bca_GomC08g35390.mRNA1 Alkaloid STR medium pass
Bca_GomC08g36670.mRNA1 Alkaloid STR medium pass
Bca_GomC08g37160.mRNA1 Alkaloid STR medium pass
Bca_GomC08g39940.mRNA1 Alkaloid STR medium pass
Bca_GomC08g39950.mRNA1 Alkaloid STR medium pass
Bca_GomC09g42510.mRNA1 Alkaloid STR medium pass
Bca_GomC09g44690.mRNA1 Alkaloid STR low borderline
Bca_GomC09g51730.mRNA1 Alkaloid STR medium pass
Bca_GomC09g58790.mRNA1 Alkaloid STR low borderline
Bca_GomB01g00770.mRNA1 Alkaloid T16H medium borderline
Bca_GomB01g00780.mRNA1 Alkaloid T16H medium borderline
Bca_GomB01g02180.mRNA1 Alkaloid T16H medium borderline
Bca_GomB01g03970.mRNA1 Alkaloid T16H medium borderline
Bca_GomB01g10940.mRNA1 Alkaloid T16H medium borderline
Bca_GomB01g10950.mRNA1 Alkaloid T16H medium borderline
Bca_GomB01g15040.mRNA1 Alkaloid T16H medium borderline
Bca_GomB01g23080.mRNA1 Alkaloid T16H medium borderline
Bca_GomB01g41800.mRNA1 Alkaloid T16H medium borderline
Bca_GomB01g41810.mRNA1 Alkaloid T16H medium borderline
Bca_GomB01g67400.mRNA1 Alkaloid T16H low borderline
Bca_GomB02g01120.mRNA1 Alkaloid T16H medium borderline
Bca_GomB02g11170.mRNA1 Alkaloid T16H medium borderline
Bca_GomB02g11750.mRNA1 Alkaloid T16H low borderline
Bca_GomB02g20570.mRNA1 Alkaloid T16H medium borderline
Bca_GomB02g52490.mRNA1 Alkaloid T16H medium borderline
Bca_GomB02g52700.mRNA1 Alkaloid T16H medium borderline
Bca_GomB02g66060.mRNA1 Alkaloid T16H low borderline
Bca_GomB02g66410.mRNA1 Alkaloid T16H low borderline
Bca_GomB02g67850.mRNA1 Alkaloid T16H medium borderline
Bca_GomB02g96890.mRNA1 Alkaloid T16H medium borderline
Bca_GomB02g99550.mRNA1 Alkaloid T16H low borderline
Bca_GomB03g08080.mRNA1 Alkaloid T16H medium borderline
Bca_GomB03g08120.mRNA1 Alkaloid T16H medium borderline
Bca_GomB03g08450.mRNA1 Alkaloid T16H medium borderline
Bca_GomB03g08490.mRNA1 Alkaloid T16H medium borderline
Bca_GomB03g09360.mRNA1 Alkaloid T16H medium borderline
Bca_GomB03g17060.mRNA1 Alkaloid T16H medium borderline
Bca_GomB03g17100.mRNA1 Alkaloid T16H medium borderline
Bca_GomB03g17380.mRNA1 Alkaloid T16H medium borderline
Bca_GomB04g00500.mRNA1 Alkaloid T16H medium pass