PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Bca_GomC03g86640.mRNA1 Alkaloid T16H medium borderline
Bca_GomC04g20080.mRNA1 Alkaloid T16H medium borderline
Bca_GomC04g21610.mRNA1 Alkaloid T16H medium borderline
Bca_GomC04g45990.mRNA1 Alkaloid T16H low borderline
Bca_GomC04g46770.mRNA1 Alkaloid T16H medium borderline
Bca_GomC04g52390.mRNA1 Alkaloid T16H medium borderline
Bca_GomC04g52410.mRNA1 Alkaloid T16H medium borderline
Bca_GomC04g55690.mRNA1 Alkaloid T16H medium borderline
Bca_GomC04g56480.mRNA1 Alkaloid T16H medium borderline
Bca_GomC04g65100.mRNA1 Alkaloid T16H medium borderline
Bca_GomC05g01800.mRNA1 Alkaloid T16H medium borderline
Bca_GomC05g02830.mRNA1 Alkaloid T16H medium borderline
Bca_GomC05g12770.mRNA1 Alkaloid T16H medium borderline
Bca_GomC05g51130.mRNA1 Alkaloid T16H medium borderline
Bca_GomC05g51150.mRNA1 Alkaloid T16H medium borderline
Bca_GomC05g52470.mRNA1 Alkaloid T16H low borderline
Bca_GomC05g59550.mRNA1 Alkaloid T16H medium borderline
Bca_GomC05g59560.mRNA1 Alkaloid T16H medium borderline
Bca_GomC07g07100.mRNA1 Alkaloid T16H medium borderline
Bca_GomC07g15380.mRNA1 Alkaloid T16H medium borderline
Bca_GomC07g25860.mRNA1 Alkaloid T16H low borderline
Bca_GomC07g41130.mRNA1 Alkaloid T16H medium borderline
Bca_GomC08g12620.mRNA1 Alkaloid T16H medium borderline
Bca_GomC08g23800.mRNA1 Alkaloid T16H medium borderline
Bca_GomC08g24710.mRNA1 Alkaloid T16H medium borderline
Bca_GomC08g24750.mRNA1 Alkaloid T16H medium borderline
Bca_GomC08g24780.mRNA1 Alkaloid T16H medium borderline
Bca_GomC08g49540.mRNA1 Alkaloid T16H medium borderline
Bca_GomC08g61490.mRNA1 Alkaloid T16H medium borderline
Bca_GomC09g06030.mRNA1 Alkaloid T16H medium borderline
Bca_GomC09g60940.mRNA1 Alkaloid T16H medium borderline
Bca_GomB01g02250.mRNA1 Alkaloid T3O medium borderline
Bca_GomB01g03990.mRNA1 Alkaloid T3O medium borderline
Bca_GomB01g04000.mRNA1 Alkaloid T3O medium borderline
Bca_GomB01g07380.mRNA1 Alkaloid T3O medium borderline
Bca_GomB01g07490.mRNA1 Alkaloid T3O medium borderline
Bca_GomB01g15030.mRNA1 Alkaloid T3O medium borderline
Bca_GomB01g15920.mRNA1 Alkaloid T3O medium pass
Bca_GomB01g22510.mRNA1 Alkaloid T3O low borderline
Bca_GomB01g25150.mRNA1 Alkaloid T3O medium pass
Bca_GomB01g30690.mRNA1 Alkaloid T3O medium borderline
Bca_GomB01g41830.mRNA1 Alkaloid T3O medium borderline
Bca_GomB01g43080.mRNA1 Alkaloid T3O medium pass
Bca_GomB01g49430.mRNA1 Alkaloid T3O medium pass
Bca_GomB01g49580.mRNA1 Alkaloid T3O medium pass
Bca_GomB01g61760.mRNA1 Alkaloid T3O medium pass
Bca_GomB01g70580.mRNA1 Alkaloid T3O medium borderline
Bca_GomB01g77410.mRNA1 Alkaloid T3O medium pass
Bca_GomB01g77440.mRNA1 Alkaloid T3O medium pass
Bca_GomB02g02020.mRNA1 Alkaloid T3O medium borderline