PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Bca_GomB01g48130.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomB01g71690.mRNA1 Alkaloid 7DLH low borderline
Bca_GomB02g82310.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomB02g83380.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomB03g10060.mRNA1 Alkaloid 7DLH low borderline
Bca_GomB03g11100.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomB03g11500.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomB03g21350.mRNA2 Alkaloid 7DLH medium borderline
Bca_GomB03g36560.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomB03g67190.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomB04g69240.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomB04g69250.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomB06g17350.mRNA2 Alkaloid 7DLH medium borderline
Bca_GomB06g69190.mRNA1 Alkaloid 7DLH low borderline
Bca_GomB07g19270.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomB07g19300.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomB07g19400.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomB07g52130.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomB07g52140.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomB07g52360.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomB07g52370.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomB07g52380.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomB07g52410.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomB08g23450.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomC01g02310.mRNA1 Alkaloid 7DLH low borderline
Bca_GomC02g17260.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomC02g17350.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomC02g48990.mRNA1 Alkaloid 7DLH low borderline
Bca_GomC03g24290.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomC03g50530.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomC03g50540.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomC03g50570.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomC03g50580.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomC03g50590.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomC04g08050.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomC04g43290.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomC05g50930.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomC05g50940.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomC05g50950.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomC06g25610.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomC07g08910.mRNA1 Alkaloid 7DLH low borderline
Bca_GomC07g33040.mRNA1 Alkaloid 7DLH low borderline
Bca_GomC07g42590.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomC08g25230.mRNA1 Alkaloid 7DLH low borderline
Bca_GomC08g54630.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomC08g54640.mRNA1 Alkaloid 7DLH medium borderline
Bca_GomB02g17130.mRNA1 Alkaloid 8HGO medium borderline
Bca_GomB02g59960.mRNA1 Alkaloid 8HGO medium borderline
Bca_GomB02g60030.mRNA1 Alkaloid 8HGO medium borderline
Bca_GomB02g60260.mRNA1 Alkaloid 8HGO medium borderline