PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Bca_GomB02g68760.mRNA1 Flavonoid IFS low borderline
Bca_GomB02g69090.mRNA1 Flavonoid IFS low borderline
Bca_GomB02g69360.mRNA1 Flavonoid IFS low borderline
Bca_GomB02g69370.mRNA1 Flavonoid IFS low borderline
Bca_GomB02g69380.mRNA1 Flavonoid IFS low borderline
Bca_GomB02g70430.mRNA1 Flavonoid IFS medium borderline
Bca_GomB02g71090.mRNA1 Flavonoid IFS low borderline
Bca_GomB02g74540.mRNA1 Flavonoid IFS low borderline
Bca_GomB02g80410.mRNA1 Flavonoid IFS low borderline
Bca_GomB02g80640.mRNA1 Flavonoid IFS low borderline
Bca_GomB02g82470.mRNA1 Flavonoid IFS medium borderline
Bca_GomB02g82480.mRNA1 Flavonoid IFS medium borderline
Bca_GomB02g82490.mRNA1 Flavonoid IFS medium borderline
Bca_GomB02g83510.mRNA1 Flavonoid IFS medium borderline
Bca_GomB02g85890.mRNA1 Flavonoid IFS medium borderline
Bca_GomB02g86260.mRNA1 Flavonoid IFS medium borderline
Bca_GomB02g93720.mRNA1 Flavonoid IFS medium borderline
Bca_GomB02g97180.mRNA1 Flavonoid IFS low borderline
Bca_GomB02g97330.mRNA1 Flavonoid IFS medium borderline
Bca_GomB02g97390.mRNA1 Flavonoid IFS low borderline
Bca_GomB02g97890.mRNA1 Flavonoid IFS medium borderline
Bca_GomB02g97900.mRNA1 Flavonoid IFS medium borderline
Bca_GomB02g97910.mRNA1 Flavonoid IFS medium borderline
Bca_GomB02g98780.mRNA1 Flavonoid IFS low borderline
Bca_GomB02g98810.mRNA1 Flavonoid IFS low borderline
Bca_GomB02g98840.mRNA1 Flavonoid IFS low borderline
Bca_GomB02g99550.mRNA1 Flavonoid IFS low borderline
Bca_GomB03g00600.mRNA1 Flavonoid IFS low borderline
Bca_GomB03g09350.mRNA1 Flavonoid IFS medium borderline
Bca_GomB03g09360.mRNA1 Flavonoid IFS medium borderline
Bca_GomB03g09370.mRNA1 Flavonoid IFS medium borderline
Bca_GomB03g09380.mRNA1 Flavonoid IFS medium borderline
Bca_GomB03g11100.mRNA1 Flavonoid IFS low borderline
Bca_GomB03g11500.mRNA1 Flavonoid IFS low borderline
Bca_GomB03g13170.mRNA1 Flavonoid IFS low borderline
Bca_GomB03g13640.mRNA1 Flavonoid IFS low borderline
Bca_GomB03g15390.mRNA1 Flavonoid IFS medium borderline
Bca_GomB03g17060.mRNA1 Flavonoid IFS medium borderline
Bca_GomB03g20610.mRNA1 Flavonoid IFS low borderline
Bca_GomB03g20620.mRNA1 Flavonoid IFS low borderline
Bca_GomB03g21350.mRNA2 Flavonoid IFS low borderline
Bca_GomB03g29280.mRNA1 Flavonoid IFS medium borderline
Bca_GomB03g36560.mRNA1 Flavonoid IFS low borderline
Bca_GomB03g36570.mRNA1 Flavonoid IFS low borderline
Bca_GomB03g49760.mRNA1 Flavonoid IFS low borderline
Bca_GomB03g52220.mRNA1 Flavonoid IFS low borderline
Bca_GomB03g53080.mRNA1 Flavonoid IFS medium borderline
Bca_GomB03g59380.mRNA1 Flavonoid IFS low borderline
Bca_GomB03g59470.mRNA1 Flavonoid IFS low borderline
Bca_GomB03g65970.mRNA1 Flavonoid IFS low borderline