PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

/

Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLGT
Reset
Protein/Isoform Record Pathway Family Confidence Status
Bca_GomB05g50250.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB05g54600.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomB05g55160.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB05g55180.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB05g55190.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB05g57030.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomB05g57070.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomB05g62540.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB05g88310.mRNA1 Alkaloid 7DLGT high pass
Bca_GomB05g89600.mRNA1 Alkaloid 7DLGT high pass
Bca_GomB06g03710.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB06g06110.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB06g21170.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomB06g21190.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB06g21200.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB06g21330.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomB06g31840.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomB06g35320.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB06g35340.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB06g39340.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomB06g58780.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomB06g58920.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB06g69550.mRNA1 Alkaloid 7DLGT high pass
Bca_GomB07g05210.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB07g25300.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomB07g25490.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB07g25630.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB07g28810.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomB07g32030.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB07g33080.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB07g47130.mRNA3 Alkaloid 7DLGT low borderline
Bca_GomB07g47140.mRNA2 Alkaloid 7DLGT low borderline
Bca_GomB07g53870.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomB07g60690.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB07g60710.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomB07g62830.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB07g76380.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB08g01390.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB08g18170.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomB08g18530.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomB08g22700.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB08g22710.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB08g22720.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB08g25080.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB08g25450.mRNA2 Alkaloid 7DLGT low borderline
Bca_GomB08g26480.mRNA2 Alkaloid 7DLGT medium pass
Bca_GomB08g29890.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB08g29900.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomB08g29910.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomB08g30570.mRNA1 Alkaloid 7DLGT medium pass