PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ANR
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Gene Pathway Family Confidence Status
Bca_GomB01g11640.mRNA1 Flavonoid ANR medium borderline
Bca_GomB01g32440.mRNA1 Flavonoid ANR low borderline
Bca_GomB01g74810.mRNA1 Flavonoid ANR medium borderline
Bca_GomB01g75390.mRNA1 Flavonoid ANR medium borderline
Bca_GomB02g102500.mRNA1 Flavonoid ANR medium borderline
Bca_GomB02g39100.mRNA1 Flavonoid ANR medium borderline
Bca_GomB02g44150.mRNA1 Flavonoid ANR low borderline
Bca_GomB02g56250.mRNA1 Flavonoid ANR medium borderline
Bca_GomB02g73300.mRNA1 Flavonoid ANR low borderline
Bca_GomB02g73460.mRNA1 Flavonoid ANR low borderline
Bca_GomB02g89630.mRNA1 Flavonoid ANR medium borderline
Bca_GomB02g94630.mRNA2 Flavonoid ANR medium pass
Bca_GomB02g95230.mRNA1 Flavonoid ANR medium pass
Bca_GomB03g53360.mRNA1 Flavonoid ANR medium borderline
Bca_GomB03g58480.mRNA1 Flavonoid ANR medium borderline
Bca_GomB03g69180.mRNA1 Flavonoid ANR low borderline
Bca_GomB03g69200.mRNA1 Flavonoid ANR medium pass
Bca_GomB03g90130.mRNA1 Flavonoid ANR medium borderline
Bca_GomB03g92770.mRNA1 Flavonoid ANR medium borderline
Bca_GomB04g03130.mRNA1 Flavonoid ANR medium borderline
Bca_GomB04g22060.mRNA1 Flavonoid ANR medium borderline
Bca_GomB04g22370.mRNA1 Flavonoid ANR medium borderline
Bca_GomB04g47300.mRNA1 Flavonoid ANR medium borderline
Bca_GomB04g47310.mRNA1 Flavonoid ANR medium borderline
Bca_GomB04g47320.mRNA1 Flavonoid ANR medium borderline
Bca_GomB04g47330.mRNA1 Flavonoid ANR medium borderline
Bca_GomB04g47340.mRNA1 Flavonoid ANR medium borderline
Bca_GomB04g51120.mRNA1 Flavonoid ANR medium borderline
Bca_GomB04g67710.mRNA1 Flavonoid ANR medium borderline
Bca_GomB04g71560.mRNA1 Flavonoid ANR low borderline
Bca_GomB04g75710.mRNA1 Flavonoid ANR medium borderline
Bca_GomB05g22610.mRNA1 Flavonoid ANR medium borderline
Bca_GomB05g23190.mRNA1 Flavonoid ANR medium borderline
Bca_GomB05g30020.mRNA1 Flavonoid ANR low borderline
Bca_GomB05g38700.mRNA1 Flavonoid ANR low borderline
Bca_GomB05g39200.mRNA1 Flavonoid ANR low borderline
Bca_GomB05g39300.mRNA1 Flavonoid ANR low borderline
Bca_GomB05g78020.mRNA1 Flavonoid ANR medium borderline
Bca_GomB06g16750.mRNA1 Flavonoid ANR medium borderline
Bca_GomB06g16810.mRNA1 Flavonoid ANR high pass
Bca_GomB06g16820.mRNA1 Flavonoid ANR medium borderline
Bca_GomB06g16920.mRNA1 Flavonoid ANR high pass
Bca_GomB06g81980.mRNA1 Flavonoid ANR medium borderline
Bca_GomB07g27560.mRNA1 Flavonoid ANR medium borderline
Bca_GomB07g27570.mRNA1 Flavonoid ANR medium pass
Bca_GomB07g28050.mRNA1 Flavonoid ANR medium borderline
Bca_GomB07g64590.mRNA1 Flavonoid ANR medium borderline
Bca_GomB07g76170.mRNA1 Flavonoid ANR medium borderline
Bca_GomB07g78060.mRNA1 Flavonoid ANR medium pass
Bca_GomB07g78070.mRNA1 Flavonoid ANR medium pass