PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ANS/LDOX
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Gene Pathway Family Confidence Status
Bca_GomB01g10910.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomB01g31460.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomB03g02350.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomB03g03740.mRNA1 Flavonoid ANS/LDOX low borderline
Bca_GomB03g19210.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomB03g50510.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomB03g70200.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomB03g71280.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomB03g71340.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomB03g89450.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomB04g55250.mRNA2 Flavonoid ANS/LDOX medium borderline
Bca_GomB05g44760.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomB06g23690.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomB06g23800.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomB06g47180.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomB06g57660.mRNA1 Flavonoid ANS/LDOX low borderline
Bca_GomB06g59110.mRNA1 Flavonoid ANS/LDOX low borderline
Bca_GomB06g88330.mRNA1 Flavonoid ANS/LDOX medium pass
Bca_GomB08g01040.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomB08g28460.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomB08g64790.mRNA1 Flavonoid ANS/LDOX low borderline
Bca_GomB08g64800.mRNA1 Flavonoid ANS/LDOX low borderline
Bca_GomB08g78580.mRNA1 Flavonoid ANS/LDOX medium pass
Bca_GomB08g78690.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomB08g78830.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomC01g30880.mRNA1 Flavonoid ANS/LDOX low borderline
Bca_GomC02g34880.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomC03g17280.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomC03g17830.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomC03g19660.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomC03g19690.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomC04g04210.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomC04g14990.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomC04g29180.mRNA1 Flavonoid ANS/LDOX low borderline
Bca_GomC04g55720.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomC05g03440.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomC05g03490.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomC05g04520.mRNA1 Flavonoid ANS/LDOX low borderline
Bca_GomC05g05180.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomC05g06870.mRNA1 Flavonoid ANS/LDOX medium pass
Bca_GomC05g08000.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomC05g32950.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomC06g56460.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomC07g01570.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomC07g18060.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomC07g55610.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomC08g32670.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomC08g52230.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomC08g52570.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomC08g54350.mRNA1 Flavonoid ANS/LDOX medium borderline