PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Bca_GomC04g55080.mRNA1 Terpenoid BAHD medium pass BAHD__00050__sp_Q6DR03_ZDHC3_ARATH
Bca_GomC04g57020.mRNA1 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
Bca_GomC04g57140.mRNA1 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomC04g59250.mRNA1 Terpenoid BAHD medium pass BAHD__00027__sp_O80437_GPAT6_ARATH
Bca_GomC04g60460.mRNA2 Terpenoid BAHD medium pass BAHD__00029__sp_O80685_ZDHC4_ARATH
Bca_GomC04g60530.mRNA1 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Bca_GomC04g60730.mRNA1 Terpenoid BAHD medium pass BAHD__00031__sp_P0DO25_AT9_ACTDE
Bca_GomC04g60760.mRNA1 Terpenoid BAHD medium pass BAHD__00031__sp_P0DO25_AT9_ACTDE
Bca_GomC04g61480.mRNA1 Terpenoid BAHD medium pass BAHD__00029__sp_O80685_ZDHC4_ARATH
Bca_GomC04g63090.mRNA1 Terpenoid BAHD medium pass BAHD__00064__sp_Q93ZR6_WSD1_ARATH
Bca_GomC04g65140.mRNA1 Terpenoid BAHD medium pass BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Bca_GomC05g01750.mRNA1 Terpenoid BAHD medium pass BAHD__00084__sp_Q9M115_ZDH16_ARATH
Bca_GomC05g02270.mRNA1 Terpenoid BAHD medium pass BAHD__00041__sp_Q4VCM1_LCAT2_ARATH
Bca_GomC05g02310.mRNA1 Terpenoid BAHD medium pass BAHD__00041__sp_Q4VCM1_LCAT2_ARATH
Bca_GomC05g02580.mRNA1 Terpenoid BAHD medium pass BAHD__00083__sp_Q9LMM0_GPAT4_ARATH
Bca_GomC05g03480.mRNA1 Terpenoid BAHD medium pass BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
Bca_GomC05g04500.mRNA1 Terpenoid BAHD medium pass BAHD__00074__sp_Q9FFQ7_FACT_ARATH
Bca_GomC05g04980.mRNA1 Terpenoid BAHD medium pass BAHD__00041__sp_Q4VCM1_LCAT2_ARATH
Bca_GomC05g07020.mRNA1 Terpenoid BAHD medium pass BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
Bca_GomC05g07070.mRNA1 Terpenoid BAHD medium pass BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
Bca_GomC05g07080.mRNA1 Terpenoid BAHD medium pass BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
Bca_GomC05g07090.mRNA1 Terpenoid BAHD medium pass BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
Bca_GomC05g07930.mRNA1 Terpenoid BAHD medium pass BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
Bca_GomC05g12340.mRNA1 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomC05g13610.mRNA1 Terpenoid BAHD medium pass BAHD__00017__sp_F4IDU4_MBOA1_ARATH
Bca_GomC05g13620.mRNA1 Terpenoid BAHD medium pass BAHD__00017__sp_F4IDU4_MBOA1_ARATH
Bca_GomC05g14040.mRNA1 Terpenoid BAHD medium pass BAHD__00017__sp_F4IDU4_MBOA1_ARATH
Bca_GomC05g17150.mRNA1 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
Bca_GomC05g17710.mRNA1 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
Bca_GomC05g29970.mRNA1 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
Bca_GomC05g31020.mRNA1 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomC05g31820.mRNA1 Terpenoid BAHD medium pass BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN
Bca_GomC05g34000.mRNA1 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomC05g35390.mRNA1 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomC05g35660.mRNA1 Terpenoid BAHD medium pass BAHD__00034__sp_P10349_GPAT2_CUCMO
Bca_GomC05g36800.mRNA1 Terpenoid BAHD medium pass BAHD__00094__sp_Q9SYC8_LPAT3_ARATH
Bca_GomC05g37980.mRNA1 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
Bca_GomC05g40320.mRNA1 Terpenoid BAHD medium pass BAHD__00034__sp_P10349_GPAT2_CUCMO
Bca_GomC05g51910.mRNA1 Terpenoid BAHD low borderline BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Bca_GomC05g51950.mRNA1 Terpenoid BAHD low borderline BAHD__00084__sp_Q9M115_ZDH16_ARATH
Bca_GomC05g54410.mRNA1 Terpenoid BAHD medium pass BAHD__00071__sp_Q9CAY3_GPAT5_ARATH
Bca_GomC05g55480.mRNA1 Terpenoid BAHD medium pass BAHD__00071__sp_Q9CAY3_GPAT5_ARATH
Bca_GomC05g56370.mRNA1 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
Bca_GomC05g56380.mRNA2 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomC05g56460.mRNA1 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomC05g58940.mRNA1 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Bca_GomC05g59060.mRNA1 Terpenoid BAHD medium pass BAHD__00062__sp_Q93V61_LCAT3_ARATH
Bca_GomC05g59510.mRNA1 Terpenoid BAHD low borderline BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Bca_GomC06g01590.mRNA1 Terpenoid BAHD medium pass BAHD__00074__sp_Q9FFQ7_FACT_ARATH
Bca_GomC06g06230.mRNA1 Terpenoid BAHD low borderline BAHD__00088__sp_Q9M7Z1_ODB2_ARATH