PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

/

Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
Reset
Protein/Isoform Record Pathway Family Confidence Status Best Target
Bca_GomC07g21650.mRNA1 Terpenoid BAHD low borderline BAHD__00077__sp_Q9FNA9_PDAT1_ARATH
Bca_GomC07g26070.mRNA1 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Bca_GomC07g26080.mRNA1 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Bca_GomC07g36370.mRNA1 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Bca_GomC07g38820.mRNA1 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Bca_GomC07g43410.mRNA1 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Bca_GomC07g46600.mRNA1 Terpenoid BAHD medium pass BAHD__00067__sp_Q9ASU1_DGAT2_ARATH
Bca_GomC07g47050.mRNA1 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
Bca_GomC07g51420.mRNA1 Terpenoid BAHD medium pass BAHD__00062__sp_Q93V61_LCAT3_ARATH
Bca_GomC07g52990.mRNA1 Terpenoid BAHD medium pass BAHD__00065__sp_Q94C49_ZDH18_ARATH
Bca_GomC07g53930.mRNA1 Terpenoid BAHD low borderline BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Bca_GomC07g54120.mRNA1 Terpenoid BAHD medium pass BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
Bca_GomC07g54420.mRNA1 Terpenoid BAHD medium pass BAHD__00023__sp_O22975_LPAAT_ARATH
Bca_GomC07g58770.mRNA1 Terpenoid BAHD medium pass BAHD__00054__sp_Q8GYW8_SCT_ARATH
Bca_GomC07g59380.mRNA2 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomC07g59740.mRNA1 Terpenoid BAHD medium pass BAHD__00082__sp_Q9LLY4_LPAT1_BRANA
Bca_GomC07g59770.mRNA1 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomC07g59940.mRNA1 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomC07g60860.mRNA1 Terpenoid BAHD medium pass BAHD__00095__sp_Q9SZ58_BRAT1_ARATH
Bca_GomC07g67270.mRNA1 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomC07g68090.mRNA1 Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
Bca_GomC08g01690.mRNA1 Terpenoid BAHD medium pass BAHD__00067__sp_Q9ASU1_DGAT2_ARATH
Bca_GomC08g01990.mRNA1 Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Bca_GomC08g08120.mRNA1 Terpenoid BAHD medium pass BAHD__00069__sp_Q9C5W0_DGAT3_ARATH
Bca_GomC08g11280.mRNA1 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomC08g14210.mRNA1 Terpenoid BAHD medium pass BAHD__00028__sp_O80467_SDT_ARATH
Bca_GomC08g15050.mRNA1 Terpenoid BAHD low borderline BAHD__00084__sp_Q9M115_ZDH16_ARATH
Bca_GomC08g15420.mRNA1 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
Bca_GomC08g18160.mRNA1 Terpenoid BAHD medium pass BAHD__00089__sp_Q9SB58_ZDH19_ARATH
Bca_GomC08g23200.mRNA1 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomC08g31810.mRNA1 Terpenoid BAHD medium pass BAHD__00074__sp_Q9FFQ7_FACT_ARATH
Bca_GomC08g31890.mRNA1 Terpenoid BAHD medium pass BAHD__00086__sp_Q9M306_ZDH10_ARATH
Bca_GomC08g32230.mRNA1 Terpenoid BAHD medium pass BAHD__00087__sp_Q9M3B1_WSD6_ARATH
Bca_GomC08g33190.mRNA1 Terpenoid BAHD low borderline BAHD__00073__sp_Q9FF86_DCR_ARATH
Bca_GomC08g33970.mRNA1 Terpenoid BAHD medium pass BAHD__00093__sp_Q9SV07_ASAT1_ARATH
Bca_GomC08g34000.mRNA1 Terpenoid BAHD medium pass BAHD__00093__sp_Q9SV07_ASAT1_ARATH
Bca_GomC08g39800.mRNA1 Terpenoid BAHD medium pass BAHD__00013__sp_B3DN87_ZDH12_ARATH
Bca_GomC08g39820.mRNA1 Terpenoid BAHD medium pass BAHD__00085__sp_Q9M1K5_ZDH13_ARATH
Bca_GomC08g40570.mRNA1 Terpenoid BAHD medium pass BAHD__00058__sp_Q8LG50_LPAT2_ARATH
Bca_GomC08g43530.mRNA1 Terpenoid BAHD medium pass BAHD__00060__sp_Q8VYP5_ZDH14_ARATH
Bca_GomC08g44950.mRNA1 Terpenoid BAHD medium pass BAHD__00028__sp_O80467_SDT_ARATH
Bca_GomC08g45360.mRNA1 Terpenoid BAHD low borderline BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Bca_GomC08g45610.mRNA1 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Bca_GomC08g47090.mRNA1 Terpenoid BAHD medium pass BAHD__00093__sp_Q9SV07_ASAT1_ARATH
Bca_GomC08g48900.mRNA1 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomC08g49160.mRNA1 Terpenoid BAHD medium pass BAHD__00028__sp_O80467_SDT_ARATH
Bca_GomC08g49480.mRNA1 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomC08g49580.mRNA1 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
Bca_GomC08g55930.mRNA1 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
Bca_GomC08g56280.mRNA1 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH