PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Bca_GomC08g62530.mRNA1 Terpenoid BAHD medium pass BAHD__00041__sp_Q4VCM1_LCAT2_ARATH
Bca_GomC08g62880.mRNA1 Terpenoid BAHD low borderline BAHD__00044__sp_Q56WD9_THIK2_ARATH
Bca_GomC08g63840.mRNA1 Terpenoid BAHD medium pass BAHD__00041__sp_Q4VCM1_LCAT2_ARATH
Bca_GomC08g65570.mRNA1 Terpenoid BAHD medium pass BAHD__00083__sp_Q9LMM0_GPAT4_ARATH
Bca_GomC08g65640.mRNA1 Terpenoid BAHD medium pass BAHD__00083__sp_Q9LMM0_GPAT4_ARATH
Bca_GomC09g01360.mRNA1 Terpenoid BAHD low borderline BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Bca_GomC09g02510.mRNA1 Terpenoid BAHD medium pass BAHD__00083__sp_Q9LMM0_GPAT4_ARATH
Bca_GomC09g03120.mRNA1 Terpenoid BAHD medium pass BAHD__00048__sp_Q5M757_ZDH15_ARATH
Bca_GomC09g03440.mRNA1 Terpenoid BAHD medium pass BAHD__00048__sp_Q5M757_ZDH15_ARATH
Bca_GomC09g03810.mRNA1 Terpenoid BAHD medium pass BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
Bca_GomC09g04090.mRNA1 Terpenoid BAHD medium pass BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
Bca_GomC09g04110.mRNA1 Terpenoid BAHD medium pass BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
Bca_GomC09g05240.mRNA1 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Bca_GomC09g06060.mRNA1 Terpenoid BAHD medium pass BAHD__00027__sp_O80437_GPAT6_ARATH
Bca_GomC09g06210.mRNA1 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Bca_GomC09g07030.mRNA1 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Bca_GomC09g08480.mRNA1 Terpenoid BAHD medium pass BAHD__00037__sp_Q3EBC2_ZDHC5_ARATH
Bca_GomC09g10780.mRNA1 Terpenoid BAHD low borderline BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Bca_GomC09g12900.mRNA1 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Bca_GomC09g14070.mRNA1 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomC09g14230.mRNA1 Terpenoid BAHD medium pass BAHD__00038__sp_Q3EC11_ZDHC2_ARATH
Bca_GomC09g17460.mRNA1 Terpenoid BAHD medium pass BAHD__00070__sp_Q9CAN8_MBOA2_ARATH
Bca_GomC09g24880.mRNA1 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
Bca_GomC09g30180.mRNA1 Terpenoid BAHD medium pass BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
Bca_GomC09g35230.mRNA1 Terpenoid BAHD medium pass BAHD__00066__sp_Q94CK0_WSD7_ARATH
Bca_GomC09g35240.mRNA1 Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
Bca_GomC09g37670.mRNA1 Terpenoid BAHD medium pass BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
Bca_GomC09g37740.mRNA1 Terpenoid BAHD medium pass BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
Bca_GomC09g37750.mRNA1 Terpenoid BAHD medium pass BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
Bca_GomC09g41010.mRNA1 Terpenoid BAHD medium pass BAHD__00052__sp_Q8GWG0_GPAT9_ARATH
Bca_GomC09g41250.mRNA1 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
Bca_GomC09g41360.mRNA1 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomC09g43840.mRNA1 Terpenoid BAHD medium pass BAHD__00043__sp_Q52T38_ZDH22_ARATH
Bca_GomC09g44720.mRNA1 Terpenoid BAHD low borderline BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Bca_GomC09g48000.mRNA1 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
Bca_GomC09g51680.mRNA1 Terpenoid BAHD medium pass BAHD__00077__sp_Q9FNA9_PDAT1_ARATH
Bca_GomC09g52880.mRNA1 Terpenoid BAHD low borderline BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Bca_GomC09g54420.mRNA1 Terpenoid BAHD medium pass BAHD__00091__sp_Q9SLD2_DGAT1_ARATH
Bca_GomC09g56510.mRNA1 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomC09g57170.mRNA1 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomC09g57190.mRNA1 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
Bca_GomC09g57850.mRNA1 Terpenoid BAHD medium pass BAHD__00054__sp_Q8GYW8_SCT_ARATH
Bca_GomC09g59350.mRNA1 Terpenoid BAHD medium pass BAHD__00078__sp_Q9LHS7_GPAT7_ARATH
Bca_GomC09g60530.mRNA1 Terpenoid BAHD medium pass BAHD__00049__sp_Q5PNZ1_ZDH21_ARATH
Bca_GomC09g61120.mRNA1 Terpenoid BAHD medium pass BAHD__00042__sp_Q500Z2_ZDH20_ARATH
Bca_GomC09g61260.mRNA1 Terpenoid BAHD medium pass BAHD__00042__sp_Q500Z2_ZDH20_ARATH