PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
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Gene Pathway Family Confidence Status Best Target
Bca_GomB02g77990.mRNA1 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
Bca_GomB02g78330.mRNA1 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomB02g78600.mRNA1 Terpenoid BAHD medium pass BAHD__00067__sp_Q9ASU1_DGAT2_ARATH
Bca_GomB02g81140.mRNA2 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Bca_GomB02g81610.mRNA1 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Bca_GomB02g85870.mRNA1 Terpenoid BAHD low borderline BAHD__00065__sp_Q94C49_ZDH18_ARATH
Bca_GomB02g86300.mRNA1 Terpenoid BAHD medium pass BAHD__00065__sp_Q94C49_ZDH18_ARATH
Bca_GomB02g87080.mRNA1 Terpenoid BAHD low borderline BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Bca_GomB02g87120.mRNA1 Terpenoid BAHD low borderline BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Bca_GomB02g87220.mRNA1 Terpenoid BAHD medium pass BAHD__00093__sp_Q9SV07_ASAT1_ARATH
Bca_GomB02g87480.mRNA1 Terpenoid BAHD medium pass BAHD__00023__sp_O22975_LPAAT_ARATH
Bca_GomB02g87780.mRNA1 Terpenoid BAHD medium pass BAHD__00023__sp_O22975_LPAAT_ARATH
Bca_GomB02g91530.mRNA1 Terpenoid BAHD medium pass BAHD__00054__sp_Q8GYW8_SCT_ARATH
Bca_GomB02g92110.mRNA1 Terpenoid BAHD medium pass BAHD__00082__sp_Q9LLY4_LPAT1_BRANA
Bca_GomB02g92150.mRNA1 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomB02g92560.mRNA1 Terpenoid BAHD medium pass BAHD__00054__sp_Q8GYW8_SCT_ARATH
Bca_GomB02g92650.mRNA1 Terpenoid BAHD medium pass BAHD__00054__sp_Q8GYW8_SCT_ARATH
Bca_GomB02g93320.mRNA1 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomB02g93990.mRNA1 Terpenoid BAHD medium pass BAHD__00095__sp_Q9SZ58_BRAT1_ARATH
Bca_GomB03g00270.mRNA1 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomB03g00700.mRNA1 Terpenoid BAHD medium pass BAHD__00068__sp_Q9C533_ZDHC1_ARATH
Bca_GomB03g07690.mRNA1 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomB03g15060.mRNA1 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomB03g16060.mRNA1 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomB03g16590.mRNA1 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomB03g16600.mRNA1 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomB03g16680.mRNA1 Terpenoid BAHD low borderline BAHD__00054__sp_Q8GYW8_SCT_ARATH
Bca_GomB03g17050.mRNA1 Terpenoid BAHD medium pass BAHD__00054__sp_Q8GYW8_SCT_ARATH
Bca_GomB03g17370.mRNA1 Terpenoid BAHD medium pass BAHD__00054__sp_Q8GYW8_SCT_ARATH
Bca_GomB03g17450.mRNA1 Terpenoid BAHD medium pass BAHD__00092__sp_Q9SU91_LPXA_ARATH
Bca_GomB03g19380.mRNA1 Terpenoid BAHD medium pass BAHD__00089__sp_Q9SB58_ZDH19_ARATH
Bca_GomB03g23930.mRNA1 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomB03g24200.mRNA1 Terpenoid BAHD medium pass BAHD__00002__sp_A0A068BIF1_AT9_ACTER
Bca_GomB03g33100.mRNA1 Terpenoid BAHD medium pass BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Bca_GomB03g33510.mRNA1 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomB03g34010.mRNA1 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
Bca_GomB03g35030.mRNA1 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
Bca_GomB03g43050.mRNA1 Terpenoid BAHD low borderline BAHD__00077__sp_Q9FNA9_PDAT1_ARATH
Bca_GomB03g44580.mRNA1 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomB03g45230.mRNA1 Terpenoid BAHD medium pass BAHD__00034__sp_P10349_GPAT2_CUCMO
Bca_GomB03g48460.mRNA1 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomB03g48480.mRNA1 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomB03g48490.mRNA1 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomB03g49750.mRNA1 Terpenoid BAHD medium pass BAHD__00083__sp_Q9LMM0_GPAT4_ARATH
Bca_GomB03g50500.mRNA1 Terpenoid BAHD medium pass BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
Bca_GomB03g51500.mRNA1 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomB03g51510.mRNA1 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomB03g51530.mRNA1 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomB03g52910.mRNA1 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomB03g53670.mRNA1 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH