PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
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Gene Pathway Family Confidence Status Best Target
Bca_GomB03g53940.mRNA1 Terpenoid BAHD medium pass BAHD__00068__sp_Q9C533_ZDHC1_ARATH
Bca_GomB03g55210.mRNA1 Terpenoid BAHD medium pass BAHD__00030__sp_O80816_GLC_ARATH
Bca_GomB03g61020.mRNA1 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Bca_GomB03g62300.mRNA1 Terpenoid BAHD medium pass BAHD__00064__sp_Q93ZR6_WSD1_ARATH
Bca_GomB03g63120.mRNA1 Terpenoid BAHD medium pass BAHD__00064__sp_Q93ZR6_WSD1_ARATH
Bca_GomB03g63170.mRNA1 Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
Bca_GomB03g63200.mRNA1 Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
Bca_GomB03g63210.mRNA1 Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
Bca_GomB03g64660.mRNA1 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomB03g64670.mRNA1 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomB03g64690.mRNA1 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomB03g64700.mRNA1 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
Bca_GomB03g64710.mRNA1 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomB03g64740.mRNA1 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomB03g64750.mRNA1 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomB03g71550.mRNA1 Terpenoid BAHD medium pass BAHD__00097__sp_Q9ZV87_NAPES_ARATH
Bca_GomB03g73710.mRNA1 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomB03g73850.mRNA1 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
Bca_GomB03g81710.mRNA1 Terpenoid BAHD medium pass BAHD__00091__sp_Q9SLD2_DGAT1_ARATH
Bca_GomB03g82920.mRNA1 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Bca_GomB03g89560.mRNA1 Terpenoid BAHD medium pass BAHD__00097__sp_Q9ZV87_NAPES_ARATH
Bca_GomB03g93570.mRNA1 Terpenoid BAHD low borderline BAHD__00097__sp_Q9ZV87_NAPES_ARATH
Bca_GomB03g94590.mRNA1 Terpenoid BAHD medium pass BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Bca_GomB03g97640.mRNA1 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
Bca_GomB04g00780.mRNA1 Terpenoid BAHD medium pass BAHD__00060__sp_Q8VYP5_ZDH14_ARATH
Bca_GomB04g01110.mRNA1 Terpenoid BAHD medium pass BAHD__00060__sp_Q8VYP5_ZDH14_ARATH
Bca_GomB04g07360.mRNA1 Terpenoid BAHD medium pass BAHD__00091__sp_Q9SLD2_DGAT1_ARATH
Bca_GomB04g07470.mRNA1 Terpenoid BAHD medium pass BAHD__00091__sp_Q9SLD2_DGAT1_ARATH
Bca_GomB04g07690.mRNA1 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Bca_GomB04g12410.mRNA1 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Bca_GomB04g13620.mRNA1 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomB04g13830.mRNA1 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Bca_GomB04g14250.mRNA1 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Bca_GomB04g15610.mRNA1 Terpenoid BAHD low borderline BAHD__00045__sp_Q570C8_THIK5_ARATH
Bca_GomB04g17950.mRNA1 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Bca_GomB04g18000.mRNA1 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Bca_GomB04g19840.mRNA1 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Bca_GomB04g20120.mRNA1 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Bca_GomB04g20130.mRNA1 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Bca_GomB04g27600.mRNA1 Terpenoid BAHD low borderline BAHD__00001__sp_A0A068BGA5_AT1_ACTDE
Bca_GomB04g27800.mRNA1 Terpenoid BAHD medium pass BAHD__00027__sp_O80437_GPAT6_ARATH
Bca_GomB04g27920.mRNA1 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
Bca_GomB04g28270.mRNA1 Terpenoid BAHD low borderline BAHD__00001__sp_A0A068BGA5_AT1_ACTDE
Bca_GomB04g28450.mRNA1 Terpenoid BAHD medium pass BAHD__00027__sp_O80437_GPAT6_ARATH
Bca_GomB04g28550.mRNA1 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
Bca_GomB04g37930.mRNA1 Terpenoid BAHD medium pass BAHD__00070__sp_Q9CAN8_MBOA2_ARATH
Bca_GomB04g41590.mRNA1 Terpenoid BAHD medium pass BAHD__00091__sp_Q9SLD2_DGAT1_ARATH
Bca_GomB04g41830.mRNA1 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Bca_GomB04g44230.mRNA1 Terpenoid BAHD medium pass BAHD__00017__sp_F4IDU4_MBOA1_ARATH
Bca_GomB04g45070.mRNA1 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH