PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
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Gene Pathway Family Confidence Status Best Target
Bca_GomB04g45680.mRNA1 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomB04g52050.mRNA1 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
Bca_GomB04g52370.mRNA2 Terpenoid BAHD medium pass BAHD__00002__sp_A0A068BIF1_AT9_ACTER
Bca_GomB04g52750.mRNA1 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomB04g53290.mRNA1 Terpenoid BAHD medium pass BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN
Bca_GomB04g56140.mRNA1 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomB04g57230.mRNA1 Terpenoid BAHD medium pass BAHD__00012__sp_A1XWY7_CFAT_PETHY
Bca_GomB04g57720.mRNA1 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomB04g58100.mRNA1 Terpenoid BAHD medium pass BAHD__00034__sp_P10349_GPAT2_CUCMO
Bca_GomB04g64010.mRNA1 Terpenoid BAHD low borderline BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Bca_GomB04g66130.mRNA1 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Bca_GomB04g66140.mRNA1 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Bca_GomB04g73810.mRNA1 Terpenoid BAHD low borderline BAHD__00073__sp_Q9FF86_DCR_ARATH
Bca_GomB04g74510.mRNA1 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
Bca_GomB04g74530.mRNA1 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Bca_GomB05g02530.mRNA1 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Bca_GomB05g06930.mRNA1 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Bca_GomB05g12940.mRNA1 Terpenoid BAHD low borderline BAHD__00023__sp_O22975_LPAAT_ARATH
Bca_GomB05g13950.mRNA1 Terpenoid BAHD medium pass BAHD__00052__sp_Q8GWG0_GPAT9_ARATH
Bca_GomB05g16260.mRNA1 Terpenoid BAHD low borderline BAHD__00012__sp_A1XWY7_CFAT_PETHY
Bca_GomB05g16560.mRNA1 Terpenoid BAHD low borderline BAHD__00012__sp_A1XWY7_CFAT_PETHY
Bca_GomB05g19060.mRNA1 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomB05g20120.mRNA1 Terpenoid BAHD medium pass BAHD__00092__sp_Q9SU91_LPXA_ARATH
Bca_GomB05g20130.mRNA1 Terpenoid BAHD medium pass BAHD__00092__sp_Q9SU91_LPXA_ARATH
Bca_GomB05g26120.mRNA1 Terpenoid BAHD medium pass BAHD__00089__sp_Q9SB58_ZDH19_ARATH
Bca_GomB05g26240.mRNA1 Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Bca_GomB05g26570.mRNA1 Terpenoid BAHD medium pass BAHD__00023__sp_O22975_LPAAT_ARATH
Bca_GomB05g26630.mRNA1 Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Bca_GomB05g27130.mRNA1 Terpenoid BAHD low borderline BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Bca_GomB05g27650.mRNA1 Terpenoid BAHD low borderline BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Bca_GomB05g28880.mRNA1 Terpenoid BAHD medium pass BAHD__00065__sp_Q94C49_ZDH18_ARATH
Bca_GomB05g29100.mRNA1 Terpenoid BAHD medium pass BAHD__00065__sp_Q94C49_ZDH18_ARATH
Bca_GomB05g35620.mRNA1 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
Bca_GomB05g35630.mRNA1 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
Bca_GomB05g35780.mRNA1 Terpenoid BAHD medium pass BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH
Bca_GomB05g36510.mRNA1 Terpenoid BAHD medium pass BAHD__00067__sp_Q9ASU1_DGAT2_ARATH
Bca_GomB05g36580.mRNA1 Terpenoid BAHD medium pass BAHD__00051__sp_Q7XA86_ZDH11_ARATH
Bca_GomB05g37230.mRNA1 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomB05g37370.mRNA1 Terpenoid BAHD medium pass BAHD__00012__sp_A1XWY7_CFAT_PETHY
Bca_GomB05g39790.mRNA1 Terpenoid BAHD medium pass BAHD__00077__sp_Q9FNA9_PDAT1_ARATH
Bca_GomB05g40530.mRNA1 Terpenoid BAHD medium pass BAHD__00066__sp_Q94CK0_WSD7_ARATH
Bca_GomB05g40570.mRNA1 Terpenoid BAHD medium pass BAHD__00066__sp_Q94CK0_WSD7_ARATH
Bca_GomB05g40670.mRNA1 Terpenoid BAHD low borderline BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Bca_GomB05g42560.mRNA1 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomB05g43500.mRNA1 Terpenoid BAHD low borderline BAHD__00001__sp_A0A068BGA5_AT1_ACTDE
Bca_GomB05g43520.mRNA1 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Bca_GomB05g47940.mRNA1 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Bca_GomB05g48670.mRNA1 Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
Bca_GomB05g51400.mRNA1 Terpenoid BAHD low borderline BAHD__00093__sp_Q9SV07_ASAT1_ARATH
Bca_GomB05g51410.mRNA1 Terpenoid BAHD medium pass BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH