PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Bca_GomB07g16120.mRNA2 Terpenoid BAHD medium pass BAHD__00071__sp_Q9CAY3_GPAT5_ARATH
Bca_GomB07g16590.mRNA1 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
Bca_GomB07g16600.mRNA1 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomB07g21230.mRNA1 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomB07g22950.mRNA1 Terpenoid BAHD medium pass BAHD__00058__sp_Q8LG50_LPAT2_ARATH
Bca_GomB07g25790.mRNA1 Terpenoid BAHD medium pass BAHD__00079__sp_Q9LIE4_ZDHC8_ARATH
Bca_GomB07g27110.mRNA1 Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Bca_GomB07g27970.mRNA2 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomB07g32340.mRNA1 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Bca_GomB07g37450.mRNA1 Terpenoid BAHD low borderline BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Bca_GomB07g37640.mRNA1 Terpenoid BAHD low borderline BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Bca_GomB07g37820.mRNA1 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
Bca_GomB07g39990.mRNA1 Terpenoid BAHD medium pass BAHD__00037__sp_Q3EBC2_ZDHC5_ARATH
Bca_GomB07g41460.mRNA1 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Bca_GomB07g41470.mRNA1 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Bca_GomB07g42530.mRNA1 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Bca_GomB07g42710.mRNA1 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Bca_GomB07g46200.mRNA1 Terpenoid BAHD low borderline BAHD__00097__sp_Q9ZV87_NAPES_ARATH
Bca_GomB07g49690.mRNA1 Terpenoid BAHD medium pass BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH
Bca_GomB07g49880.mRNA1 Terpenoid BAHD medium pass BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH
Bca_GomB07g51170.mRNA1 Terpenoid BAHD low borderline BAHD__00073__sp_Q9FF86_DCR_ARATH
Bca_GomB07g51300.mRNA1 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Bca_GomB07g51310.mRNA1 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Bca_GomB07g52860.mRNA1 Terpenoid BAHD low borderline BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Bca_GomB07g53000.mRNA1 Terpenoid BAHD low borderline BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Bca_GomB07g56920.mRNA1 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomB07g57400.mRNA1 Terpenoid BAHD medium pass BAHD__00063__sp_Q93VV0_ZDHC6_ARATH
Bca_GomB07g57740.mRNA1 Terpenoid BAHD medium pass BAHD__00091__sp_Q9SLD2_DGAT1_ARATH
Bca_GomB07g60790.mRNA1 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
Bca_GomB07g60840.mRNA1 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
Bca_GomB07g60850.mRNA1 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
Bca_GomB07g62130.mRNA1 Terpenoid BAHD medium pass BAHD__00028__sp_O80467_SDT_ARATH
Bca_GomB07g64230.mRNA1 Terpenoid BAHD medium pass BAHD__00034__sp_P10349_GPAT2_CUCMO
Bca_GomB07g68370.mRNA1 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomB07g73470.mRNA1 Terpenoid BAHD medium pass BAHD__00069__sp_Q9C5W0_DGAT3_ARATH
Bca_GomB07g76290.mRNA1 Terpenoid BAHD medium pass BAHD__00094__sp_Q9SYC8_LPAT3_ARATH
Bca_GomB08g00050.mRNA1 Terpenoid BAHD low borderline BAHD__00073__sp_Q9FF86_DCR_ARATH
Bca_GomB08g01490.mRNA1 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomB08g01500.mRNA1 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomB08g03310.mRNA1 Terpenoid BAHD medium pass BAHD__00049__sp_Q5PNZ1_ZDH21_ARATH
Bca_GomB08g03770.mRNA1 Terpenoid BAHD medium pass BAHD__00049__sp_Q5PNZ1_ZDH21_ARATH
Bca_GomB08g06800.mRNA1 Terpenoid BAHD low borderline BAHD__00008__sp_A0A2Z5CVQ4_AT1_CROXC
Bca_GomB08g07000.mRNA1 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomB08g07060.mRNA1 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomB08g09830.mRNA1 Terpenoid BAHD medium pass BAHD__00066__sp_Q94CK0_WSD7_ARATH
Bca_GomB08g13010.mRNA2 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomB08g13490.mRNA1 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Bca_GomB08g15620.mRNA1 Terpenoid BAHD medium pass BAHD__00043__sp_Q52T38_ZDH22_ARATH
Bca_GomB08g17190.mRNA1 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomB08g17560.mRNA1 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH