PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BBE
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Gene Pathway Family Confidence Status
Bca_GomB08g28600.mRNA1 Alkaloid BBE medium borderline
Bca_GomB08g28620.mRNA1 Alkaloid BBE medium borderline
Bca_GomB08g28710.mRNA1 Alkaloid BBE medium borderline
Bca_GomB08g86520.mRNA1 Alkaloid BBE low borderline
Bca_GomC01g00800.mRNA1 Alkaloid BBE medium borderline
Bca_GomC01g00810.mRNA1 Alkaloid BBE medium borderline
Bca_GomC01g18600.mRNA1 Alkaloid BBE medium borderline
Bca_GomC01g18610.mRNA1 Alkaloid BBE medium borderline
Bca_GomC01g18620.mRNA1 Alkaloid BBE medium borderline
Bca_GomC01g18660.mRNA1 Alkaloid BBE medium borderline
Bca_GomC01g18670.mRNA2 Alkaloid BBE medium borderline
Bca_GomC01g18690.mRNA2 Alkaloid BBE medium borderline
Bca_GomC01g19000.mRNA2 Alkaloid BBE medium borderline
Bca_GomC01g19250.mRNA1 Alkaloid BBE medium borderline
Bca_GomC02g43280.mRNA1 Alkaloid BBE medium borderline
Bca_GomC03g75640.mRNA1 Alkaloid BBE medium borderline
Bca_GomC03g75650.mRNA1 Alkaloid BBE medium borderline
Bca_GomC03g75670.mRNA1 Alkaloid BBE medium borderline
Bca_GomC03g85190.mRNA1 Alkaloid BBE medium borderline
Bca_GomC03g85480.mRNA1 Alkaloid BBE medium borderline
Bca_GomC04g14640.mRNA1 Alkaloid BBE medium borderline
Bca_GomC04g14660.mRNA1 Alkaloid BBE medium borderline
Bca_GomC04g14680.mRNA1 Alkaloid BBE medium borderline
Bca_GomC04g55870.mRNA1 Alkaloid BBE medium borderline
Bca_GomC05g00020.mRNA1 Alkaloid BBE medium borderline
Bca_GomC05g00030.mRNA1 Alkaloid BBE low borderline
Bca_GomC05g12850.mRNA1 Alkaloid BBE medium borderline
Bca_GomC05g28800.mRNA1 Alkaloid BBE medium borderline
Bca_GomC05g28810.mRNA1 Alkaloid BBE medium borderline
Bca_GomC05g33970.mRNA1 Alkaloid BBE medium borderline
Bca_GomC05g33980.mRNA1 Alkaloid BBE medium borderline
Bca_GomC05g33990.mRNA1 Alkaloid BBE medium borderline
Bca_GomC05g34030.mRNA1 Alkaloid BBE medium borderline
Bca_GomC06g25240.mRNA2 Alkaloid BBE medium borderline
Bca_GomC06g47530.mRNA1 Alkaloid BBE medium borderline
Bca_GomC07g17680.mRNA1 Alkaloid BBE low borderline
Bca_GomC07g17810.mRNA1 Alkaloid BBE medium borderline
Bca_GomC07g19190.mRNA1 Alkaloid BBE medium borderline
Bca_GomC07g19210.mRNA1 Alkaloid BBE medium borderline
Bca_GomC07g19300.mRNA1 Alkaloid BBE medium borderline
Bca_GomC07g19350.mRNA1 Alkaloid BBE medium borderline
Bca_GomC07g27720.mRNA2 Alkaloid BBE medium borderline
Bca_GomC07g27740.mRNA1 Alkaloid BBE medium borderline
Bca_GomC07g28170.mRNA1 Alkaloid BBE medium borderline
Bca_GomC07g28180.mRNA1 Alkaloid BBE medium borderline
Bca_GomC07g28200.mRNA1 Alkaloid BBE medium borderline
Bca_GomC07g28230.mRNA1 Alkaloid BBE medium borderline
Bca_GomC07g28240.mRNA1 Alkaloid BBE medium borderline
Bca_GomC07g51720.mRNA1 Alkaloid BBE medium borderline
Bca_GomC07g51730.mRNA1 Alkaloid BBE medium borderline