PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

/

Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX2/CYP85A2
Reset
Gene Pathway Family Confidence Status
Bca_GomB03g88790.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB03g97250.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB04g00520.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB04g01010.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB04g02250.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB04g07780.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB04g10240.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB04g10340.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB04g10350.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB04g13610.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB04g14510.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB04g20550.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB04g20800.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB04g27770.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB04g27840.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB04g27850.mRNA2 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB04g28480.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB04g34050.mRNA1 Steroid BR6OX2/CYP85A2 medium borderline
Bca_GomB04g35930.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB04g51930.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB04g68620.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB04g74560.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB05g02330.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB05g10630.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB05g55710.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB05g70340.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB05g74150.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB05g84460.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB06g00280.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB06g00300.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB06g00990.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB06g12660.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB06g13250.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB06g13800.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB06g14200.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB06g17350.mRNA2 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB06g23490.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB06g23500.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB06g23570.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB06g33120.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB06g33700.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB06g51700.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB06g55590.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB06g70000.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB06g73990.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB06g75220.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB06g75880.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB06g76260.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB06g83530.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB06g83600.mRNA1 Steroid BR6OX2/CYP85A2 low borderline