PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX2/CYP85A2
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Gene Pathway Family Confidence Status
Bca_GomB07g02390.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB07g05440.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB07g09500.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB07g19300.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB07g24120.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB07g24130.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB07g24140.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB07g44440.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB07g48490.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB07g48550.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB07g56250.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB07g56260.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB07g56270.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB07g56300.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB07g62120.mRNA3 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB07g79990.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB08g19000.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB08g25500.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB08g34670.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB08g41140.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB08g49220.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB08g49250.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB08g50850.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB08g53600.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB08g63720.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB08g65870.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB08g65990.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB08g84240.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB08g91310.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB08g91370.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomB08g92910.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC01g40570.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC01g43740.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC01g48600.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC01g48640.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC02g17260.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC02g17350.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC02g30630.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC02g36160.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC02g36320.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC02g38690.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC02g40760.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC02g40780.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC02g49440.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC02g49890.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC02g50780.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC02g53960.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC03g05920.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC03g06600.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC03g19940.mRNA1 Steroid BR6OX2/CYP85A2 low borderline