PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX2/CYP85A2
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Gene Pathway Family Confidence Status
Bca_GomC03g20200.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC03g24320.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC03g25840.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC03g25850.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC03g32000.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC03g41530.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC03g41540.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC03g42550.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC03g50540.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC03g50590.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC03g54390.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC03g54420.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC03g59840.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC03g80880.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC03g81040.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC04g02120.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC04g02980.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC04g07520.mRNA2 Steroid BR6OX2/CYP85A2 medium borderline
Bca_GomC04g08050.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC04g20080.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC04g23340.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC04g40170.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC04g43290.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC04g44950.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC04g52390.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC04g52410.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC04g61410.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC04g62020.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC04g62040.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC04g62050.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC04g65670.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC05g01890.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC05g02590.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC05g02830.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC05g02890.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC05g13240.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC05g15220.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC05g29840.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC05g37470.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC05g45190.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC05g45260.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC05g50970.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC05g51120.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC05g51170.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC06g10200.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC06g21760.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC06g51880.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC06g53150.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC07g20510.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC07g25870.mRNA1 Steroid BR6OX2/CYP85A2 low borderline